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The Case of the Molecular Detective

The Case of the Molecular Detective

Released Friday, 16th February 2024
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The Case of the Molecular Detective

The Case of the Molecular Detective

The Case of the Molecular Detective

The Case of the Molecular Detective

Friday, 16th February 2024
Good episode? Give it some love!
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Episode Transcript

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0:00

Hey tumble listeners. Before we get to this

0:02

week's episode, I want to let all of

0:04

you know that Lindsay and I are going

0:06

to be doing a special Zoom Call open

0:08

to anyone who supports us unpatriotic at any

0:10

level. If you'd like to spend a little

0:12

bit of time hanging out with us on

0:14

Zoom. All. You gotta do is just

0:16

go to Patriarch and support us at any

0:18

level. One dollar. that's all it takes and

0:21

we'll send you an invite to join us

0:23

on Patriot. Just go to patriot.com/tumble Podcast, or

0:25

click the link in the episode description. Hi.

0:32

I'm Lindsay. And I marshall welcome

0:34

to Tumble the show where we explore

0:36

stories of science discovery. Today were

0:38

on the case with the

0:40

molecular detective. Does that mean a

0:42

molecule that's a detective? Like a bunch of

0:44

atoms bonded together wearing a little hat. and

0:47

the trench coats? I

0:50

love the image by it's

0:52

just the opposite. It's a

0:54

science detective who studies molecular

0:56

clues to solve big mysteries

0:58

inside our bodies. Okay,

1:02

So who is this molecular detective that were

1:04

about to meet them? Kind of imagining a

1:06

character at a mystery novel or like a

1:09

black and white detective film from the nineteen

1:11

forties. Lake and I found some hydrogen sulfide.

1:13

See, I'm going to make it talk. A

1:17

know exactly what you're talking about.

1:20

So let's set our own theme

1:22

to meet the detect. It's.

1:26

Late at night. We see the

1:28

outside of. The science lab

1:30

inside. There's a woman at her

1:32

computer. Now with towards

1:34

the door with the mysterious

1:37

silhouette. In shadows through the window.

1:40

The door opens. And I

1:42

step. Then I'm. Here

1:44

to interview her for our podcast.

1:50

Wait, are you actually in the rumor this? like

1:52

a zoom call or something? Technically it

1:55

was a google me. and

1:58

we didn't do the interview at but

2:00

you know I'm just trying to set a mood

2:02

here. Let's move on. Can

2:04

you just start by telling me your

2:06

name and title? Yes, my

2:08

name is Mona Minkara, and so I'm Dr.

2:11

Mona Minkara. I'd like to make it

2:13

clear from the beginning that I'm the one who

2:15

asks the questions. Mona

2:17

seems nice, but I start

2:19

quickly. I ask Mona what

2:22

makes her a molecular detective?

2:25

I basically call myself, we call our team,

2:27

we're a bunch of molecular detectives, we

2:29

use computers to try to

2:31

understand how do molecules interact,

2:34

how are they moving? She

2:36

doesn't sound nearly as hard-boiled as I was expecting

2:38

her to. She

2:41

sounds sort of gleeful and excited. Well,

2:45

Mona has a lot of things you might

2:47

not expect, as we're about to find out, but

2:50

she is a fan of mystery

2:52

novels. The reason why

2:54

I call us molecular detectives, it really

2:56

is like being a detective like Sherlock

2:58

Holmes was with mysteries, right? Sherlock

3:01

Holmes is one of the best made-up detectives

3:03

of all time. Exactly. So

3:06

Mona thinks of herself as a

3:08

real-life Sherlock, but for the lungs,

3:10

those big organs in our chest

3:12

that help us breathe. Let's

3:14

say there's some kind of disease in

3:16

the lungs, then you'd want to have

3:18

to figure out what is happening, and

3:20

you start asking the same type of

3:22

questions as if you're trying to solve

3:24

a mystery. Questions like, where were

3:26

you on the night of the 13th? Lung. Do

3:33

you have an alibi? Let's

3:36

just say it's the molecular version of that.

3:39

It's exactly similar type

3:41

of thinking, so that's why we're like

3:43

molecular detectives. We try to understand what

3:46

are these molecules doing? How are they

3:48

helping fighting disease? How can we help

3:50

them fight disease even more? So

3:53

she's trying to figure out who you can trust and who

3:55

you can't on this case. You

3:57

know my approach, trust no one as far as

3:59

you can... All

4:02

right, let's get to know Mona.

4:04

Then I continue my questioning. Why?

4:07

Does he do as much He does?

4:09

Curiosity. Curiosity is what drives

4:12

me and the more people tell me

4:14

that I played all a doesn't matter

4:16

or I learned the more want to

4:18

learn it. She tells me

4:20

that heard curiosity about science started

4:23

with T V shows. Honestly ever

4:25

since I was a kid and

4:27

I watched Magic School Bus and

4:29

as bizarre Bill Nye the science

4:31

guy on and I understood that

4:33

there's so many things happening around

4:35

us in the universe and I

4:37

wanted to know how it's all

4:40

words that said Mona on the

4:42

path to becoming a scientists And

4:44

later she took a turn towards

4:46

an invisible. World. And

4:48

moon, when I grew older, I

4:50

learned these molecules that a teeny

4:53

tiny that nobody can really see

4:55

that. they really improved everything. from

4:57

how we can take your medicine,

4:59

that to how when you do

5:01

a volcano experiment with baking soda

5:03

and vinegar. Why Things. He

5:06

has really fascinating how molecules make up everything

5:08

that happens in the physical world. It's like

5:11

a huge number of atoms bonded together and

5:13

then you get first. Exactly.

5:16

And that appealed to Mona

5:18

for a special reason. Why?

5:21

I am are not allowed to learn more about what they

5:23

did. And. He says nobody

5:25

can really see them and I'm blind.

5:28

I felt like you know where on

5:30

equal footing. Mona. Lost

5:32

her vision gradually during childhood

5:34

and it made her question

5:36

what she was learning about

5:38

how science works. As

5:40

soon for a long time we are

5:43

taught. science is observable. Rates science is

5:45

when you observe something and we are

5:47

taught that you can really only observe

5:50

with your eyes. Remember.

5:52

Learning Lot: Nobody's really observing these

5:54

items with their eyes, so how

5:56

can you see that? You know?

5:59

That we have. The to visualize or make

6:01

images of atoms, but that's not quite

6:03

the same as actually seeing them. Exactly.

6:07

Since. The sizes nudges observable with

6:09

the on his. The. So many

6:11

different ways to. Deserves. Mona.

6:14

Says that being blind has

6:16

helped her notice things cited

6:18

scientists mess with other signs

6:21

of observations. And so that

6:23

it be sued touch that could be to

6:25

sound I feel like that gives me. An.

6:28

Advantage because everybody's thought to use

6:30

their eyes first, But when you

6:32

can't use your eyes than you

6:34

have to be more pleases and

6:36

clever. It's sad to observe what's

6:39

around you. Let's call

6:41

just like Sherlock Holmes who notice

6:43

things that others couldn't write. And

6:45

that might be one of the reasons

6:47

why Mona says Sherlock is one of

6:49

her biggest heroes. It's elementary

6:51

are gonna take a short break

6:53

and when we came back. He

6:57

some cases. This.

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we're back. So now we know

8:15

why Mona's a molecular detective, and

8:19

we're about to find out how she

8:21

helps our body track down the criminals.

8:24

Alright, so what is the scene of the crime that

8:26

she's tracking down these criminals in? Well, remember

8:28

that Mona is like the Sherlock

8:30

of the lungs? That's

8:33

because the lungs are where lots

8:35

of different disease germs enter our

8:37

body and try to make us

8:39

sick. I guess lungs are just sort of

8:41

like the first place you look, right? The

8:43

open window where all the criminals are getting in

8:45

because we need it to stay open so we

8:48

can breathe. Exactly. So

8:50

Mona is trying to help our

8:52

body catch the crooks before we

8:54

even notice them. So

8:57

what I'm working on is actually

8:59

helping you boost your immune system

9:02

to fight diseases in general better.

9:04

So the immune system is our

9:06

body's natural defense against diseases, and

9:10

Mona's focused on its tiny

9:12

molecular soldiers. So

9:14

there are these really cool molecules called

9:17

surfactant proteins, and they're immunoproteins and they're

9:19

found in your lungs, but also in

9:21

your skin, in your tears, in your

9:23

saliva, in your

9:26

digestive system. So wait, I've

9:28

got surfactant proteins everywhere, like in my

9:30

mouth right now. Can I spit them

9:32

all out? No.

9:36

Our bodies have many different kinds

9:38

of proteins, which are long chains

9:40

of molecules that have special jobs

9:42

to do. So the

9:44

surfactant protein's job is to wring

9:47

the alarm when a disease comes

9:49

through. And

9:51

these molecules are designed to

9:53

identify any disease that comes.

9:56

When it identifies it, it attaches onto it like

9:58

a little flag, those immune systems,

10:00

come kill this thing. So if

10:03

we have all these little proteins telling our immune

10:05

system to attack the disease, why do

10:07

we still get sick? Well, they

10:09

don't always catch their target, and that's

10:11

where Mona comes in. And

10:13

so what I'm working on is

10:15

try to help these immune proteins,

10:17

these molecules, to be better at

10:19

identifying the disease. Okay,

10:22

so she's like the Sherlock Holmes to

10:24

the immunoproteins' Scotland Yard. They're trying their

10:26

best, but there's a lot that they're

10:28

missing. That's why Mona's on

10:30

the case. She's looking for clues

10:32

and making deductions with the help

10:35

of technology. This is about

10:37

the power of what computers can help you.

10:39

Like, if you can make your computer help

10:41

predict certain things, then that's going to help

10:44

you have to do less guessing in

10:46

the real world. To make

10:48

these predictions, Mona programs

10:50

models into her computer,

10:52

reconstructing molecules atom by

10:54

atom. Some of

10:57

the molecules I study are actually kind of

10:59

huge in the sense of they're not huge

11:01

for us as human beings, but they're huge

11:03

in the sense there's so many atoms in the world.

11:06

Yeah, so it's sort of like trying to build a sand castle

11:08

one grain of sand at a time. Exactly.

11:11

It's a lot of grains of sand. They're

11:14

very complicated, and the twist

11:16

is that these atoms move by a

11:18

completely different set of rules. You know,

11:21

there are certain rules. You throw up

11:23

a ball, it comes back down because

11:25

of gravity. But even though we are

11:28

made up of all these atoms, the

11:30

atoms are not following the same rule,

11:32

which is kind of mind-blowing. Wait,

11:35

so this is like if Sherlock Holmes was

11:37

to say maybe the thief came in by

11:40

walking on the ceiling. Exactly.

11:43

Luckily, scientists have been working

11:45

on figuring out these new

11:47

rules of how molecules move

11:49

for a long time now. Well,

11:52

that's great. So we're not starting over completely.

11:54

We know which thieves can walk on the

11:56

ceiling and which can't. So

11:58

Mona takes the lead. The rules and

12:01

these molecules encodes them into

12:03

the program and her computer

12:05

playing out how they act

12:07

in the lungs. So. There's

12:09

one module that I say

12:11

that actually had a hundred

12:14

and fifty thousand. I needed

12:16

to know how are they

12:18

on movie, where they are

12:20

doing and so I created

12:22

a mathematical tools that allowed

12:24

me to understand how they

12:26

moved. The wait for

12:28

she needs to understand how a hundred

12:31

and fifty thousand different microscopic parts are

12:33

moving. That's that's really a lot. It

12:36

is that like her heroes,

12:38

Sherlock Holmes, Mona used. Her

12:40

sending and unique viewpoint on the

12:42

problem. To solve the mystery of

12:45

the molecule. So normally other

12:47

scientists what they'll do is. Create

12:49

a little move mates that this

12:51

and see on the computer but

12:53

I couldn't see them. I had

12:55

to create mathematical equations. That helped me

12:57

plot the movements and when I did that,

12:59

I was able to pick up patterns. That.

13:02

Nobody else, some. Literally.

13:05

Is a myth. Well. So because

13:07

so many other scientists were looking at the

13:10

molecule the same way, they were missing patterns

13:12

that became obvious when Mona looked at it

13:14

differently. Yes and it made it

13:16

easier for Moneda, understand how the

13:18

modules were working in the lungs

13:20

and how to stop them. And

13:22

for Mona, that's a big when

13:24

it. When it's like I figured

13:27

out what is module doing and

13:29

is like. That

13:31

he says he doesn't use. Oh,

13:33

it's so cool. Silly she said before,

13:35

having a different way to observe things

13:38

is actually an advantage. Absolutely

13:40

being assigned as as a blind

13:42

person has taught me. The.

13:44

Sizes bigger than all of us. That.

13:47

You don't have to see to

13:49

do. Series is all about. Solving

13:52

the mystery. And. There's so

13:54

many mysteries to solve. That. The

13:56

world is so vast and the so much out

13:58

there that we do. Now. I'm

14:01

really saddened to figure out, even if it's a

14:03

little, that. Has. So

14:06

when I leave Moon his

14:08

office, she turns back to

14:10

her computer, returning to wrangle

14:12

with the mysteries. Of

14:15

the molecular did. You

14:23

can also be a size six for

14:26

questioning. And now

14:28

think about investing in the case for.

14:30

Example: You can question people who

14:32

might have the answers that the

14:34

parents or teachers or you could

14:36

find books on the topic is

14:39

a library or search the internet

14:41

may be is had. Imagine how

14:43

you do your own experiment. For

14:45

your ideas and do a story where you

14:48

play the role that detective include the facts

14:50

you find out or your designs for experiments.

14:52

You might even create a villain his

14:54

trying to keep you from finding the

14:57

answer. Be creative and send us your

14:59

story at tumble Podcast as you know

15:01

that com would love to read. I.

15:05

Think Simone I'm in Cora

15:08

Professor of Bio Engineering and

15:10

Northeastern University where she runs

15:12

the Combine lab and like

15:14

many great detective Mona's also

15:16

guy and other cool identities

15:18

sees the blind travelers. You

15:21

can join her travels around

15:23

the world on her you

15:25

tube channel planes, trains and

15:27

keen. You can watch these

15:29

videos and get other resources about Mona

15:31

in her research and accessibility. work available

15:34

on the blog on our website Science

15:36

Podcast for kids.com. And you

15:38

can hear more from Mona

15:40

herself on the bonus interview

15:42

episode on our Petri on

15:45

Absolutely on.com/tumble podcast. This

15:47

material is based upon work supported

15:49

by the National Science Foundation under

15:51

Grant Number Two One Four Eight

15:53

Seven One One Engage in blind,

15:55

visually impaired, and cited students in

15:57

Stem with storytelling through projects special.

16:00

Thanks to the team who helped us with this

16:02

episode, Dr. Peter Walters and

16:04

Dr. Kerris Apollo and the rest

16:06

of the team at Independent Science.

16:08

Also thanks to Dr. Kelly Reidinger,

16:10

Dr. Martin Storkstieg and Dr. Victoria

16:12

Sellers at Oregon State University's STEM

16:15

Research Center and Dr. Timothy

16:17

Spuck at AUI. Sarah Roberson-Lence

16:19

edited this show and designed the

16:21

episode art. Peter Walters is our

16:23

editorial consultant for the series. Elliot

16:26

Hajaj is our production assistant

16:29

and Gary Calhoun-Jeans engineered and

16:31

makes this episode. I'm

16:34

Lindsay Patterson and I wrote this episode.

16:36

And I'm Marshall Eschimia and I made all the

16:38

music and sound design for this episode. Tumble

16:41

is a production of Tumble Media. Thanks

16:43

for listening and stay tuned for more

16:45

stories of science discovery. All

16:51

right, everybody, here we are at the end of

16:53

the episode and everyone knows what that means. It's

16:55

time for the Patreon people. We

16:57

got a bunch of birthday shout outs

16:59

to give. So here we go. First

17:01

to Ethan, we're so proud of you

17:03

for being a wonderful human with love

17:05

from mom, dad, and Cody and a

17:07

belated happy birthday on February 15th. Theodore,

17:11

keep asking questions and seeking answers and

17:13

happy birthday on February 16th. John,

17:16

another happy birthday happening on February

17:18

16th. Keep being

17:20

curious and ready for new adventures.

17:22

Mom, dad, sister, and your whole

17:24

family love you beyond, beyond. Rivers,

17:27

stay curious and happy birthday on February

17:29

18th. And a shout

17:31

out to a fierce little she wolf birdie on her

17:33

birthday on February 20th. Mom and

17:35

dad love you. Happy February

17:38

23rd birthday to Claire, everyone's favorite

17:40

future shark scientist with love from

17:42

mom, dad, and Alden. Another

17:45

happy February 23rd birthday to

17:47

June. Mom and dad love your curiosity

17:49

and your questions. Stay creative,

17:52

strong, and independent. To

17:54

Christopher and Grace, happy birthday on February 25th.

17:57

Mom and dad are proud of both of you and know you

17:59

will. accomplish your dreams. Therese,

18:02

happy birthday little dude on February 27th.

18:05

And a thanks to all of you

18:07

and to everyone who supports Tumble on

18:09

Patreon. If you want to get a

18:11

birthday shoutout of your own like these

18:13

fine folks, or have a Zoom call

18:15

with me and Lindsey, just support us

18:17

on Patreon at the $5 level or

18:19

higher by going to patreon.com/tumblepodcast. Once

18:22

again, that's patreon.com/tumblepodcast.

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