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Biology as its own metaphor (Ep 119)

Biology as its own metaphor (Ep 119)

Released Thursday, 4th April 2024
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Biology as its own metaphor (Ep 119)

Biology as its own metaphor (Ep 119)

Biology as its own metaphor (Ep 119)

Biology as its own metaphor (Ep 119)

Thursday, 4th April 2024
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Episode Transcript

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us keep big biology going strong. Now.

2:00

Onto the him. To

2:09

do so deals with to general problems

2:11

that plague biologists really, biology specific versions

2:13

of problems that plague all of us.

2:15

As we interact and think about the

2:17

world, the first thing is that we

2:19

see what we expect to see and

2:22

not what's actually there. Maybe. To

2:24

see that seen as image of the young

2:26

and old woman both trapped in the optical

2:28

illusion that first appeared on an Eighteen Eighty

2:30

Eight German postcard. Most people see either one

2:32

or the other at first, but if you

2:34

look more intently, what you see flips back

2:36

and forth. The young and the old women

2:39

are both there, but we naturally see one

2:41

of the other more readily, and it takes

2:43

real mental effort to see the other form.

2:46

Why? The some people see the old form

2:48

first and others the young? The some evidence

2:50

that people are more likely to see the

2:52

form that corresponds to their own age and

2:54

the group of people with whom they socialize

2:56

most often. And. It's also possible

2:58

that people just filter information about their

3:01

worlds and different ways. Recall that two

3:03

thousand and fifteen viral sensation. They're basically

3:05

broke the internet. The famous blue and

3:07

black stripe dress? You mean white and

3:10

gold, right? Ah, Ok, was not go

3:12

there. rather. onto the second problem, which

3:14

is related to but distinct from the

3:16

first. It's what we might call a

3:18

naming problem which you may have heard

3:21

of in relation to of all things

3:23

Buddhism. Although. Buddhism doesn't outright

3:25

claim that naming things constraints are

3:27

view of the world. It doesn't

3:29

acknowledge that words and language more

3:31

generally shape our perceptions and can

3:33

lead to attachment, suffering, and misunderstanding.

3:35

For those more scientifically inclined, a

3:38

similar objection could be raised to

3:40

using metaphors and science. Think.

3:42

The tree. Of life, molecular machines,

3:44

scenes as blueprints, information superhighway,

3:46

and others. He's metaphors provide

3:48

a beautiful shorthand for conveying

3:50

concepts and prophecies, but conversely,

3:52

they can become mental handcuffs

3:54

if we take them to

3:56

literally. These problems loom large

3:58

and a conversation today. The science writer

4:01

Fill Ball, film written over twenty

4:03

five books and contributes regularly to

4:05

publications such as The Do Scientists,

4:07

The New York Times, The Guardian,

4:09

and The Financial Times. He was

4:11

also an editor at the journal

4:13

Nature for over twenty years, with

4:15

gave him an unusually broad look

4:17

at breaking discoveries in Chemistry, physics,

4:19

and biology. We focus our conversation

4:21

on fills latest book called how

4:23

Life Works, in which he describes

4:25

recent advances across all levels of

4:28

biological organization. As you might imagine,

4:30

The book covers highly diverse topics that

4:32

there's a subtle kind of met a

4:34

theme that runs through all of the

4:36

chapters. And that is we consistently don't

4:38

really know what we think we do.

4:40

Both. Because we're usually not looking at

4:43

the process or problem for the right

4:45

angle, and even if we do, we

4:47

tend to construct metaphors that harden rapidly

4:50

into dogma. Disheartening can prevent us from

4:52

seeing readily beyond the metaphors walls. That

4:55

was a metaphor for that metaphors. I

4:58

know. But onward take for example, fills

5:00

chapter on how proteins work. We all

5:02

know how they work, right? Well in

5:05

the prevailing metaphors, the day proteins are

5:07

tiny molecular machines. We say that their

5:09

chemistries and shapes or evolved to carry

5:11

out some process, often by a fitting

5:14

together like a lock and key with

5:16

a handful of other molecules. But.

5:18

Still argues that's all wrong. The

5:20

past ten years or so have

5:22

revealed that many proteins do not

5:24

has six well defined structures, But

5:26

the rather expansive, floppy and promiscuous

5:28

and he interacted large and small

5:30

ways with hundreds, even thousands of

5:32

other molecules is fundamentally changes How

5:34

we should think about the functions

5:36

of proteins and also about the

5:38

structures of intercellular networks and the

5:40

standing Verizon available to natural selection.

5:43

For. Sure not what you get out

5:45

of most standard textbook in biology and

5:47

fill is not nearly done with big

5:50

questions including the biggest one that we

5:52

can ask which is what is life

5:54

here. Film talks about where causation comes

5:57

from in living systems most of and

5:59

therefore Scottish. It's a highly reductionist

6:01

or bottom up view of causation

6:03

feel argues. Instead that some causation.

6:05

Comes from higher levels of organization

6:07

with causality flowing downward. The basic.

6:10

Gist is it is living systems get

6:12

more complex. The information inherent. To the

6:14

new structure least the whole system to

6:16

be more than the sum of it's

6:19

parts. In other words, here we get

6:21

into yet another extended but interesting discussion

6:23

about agency, purpose and goals, and biology.

6:26

And. Finally, a significant chunk of our talk. Focuses

6:28

on what our new understanding of biology

6:30

means for medicine, how we could manipulate

6:32

complex systems to keep people healthy, and

6:34

whether they are better ways to treat

6:37

cancer. And as we do been reading

6:39

fills book, you may feel the vertigo

6:41

that comes with your point of view

6:43

suddenly flipping into an expansive new configuration.

6:46

You are such a nerd. sometimes I'm

6:48

not even sure what to say. I'm

6:50

Window Star and I'm a little embarrassed.

6:52

Okay, I'm Art Woods and I Marty

6:55

Martin and you're listening to Big Biology.

7:12

Biology Harden I read your new book How

7:14

Life Works and we both absolutely loved it

7:17

as a shared it with a lot of

7:19

friends including what a biologist who probably be

7:21

surprised as I was about how much we've

7:23

learned about how life works at different levels

7:25

of organization. Things are very different since we

7:28

learn them as students with wanna spend most

7:30

of our time on discoveries in the book

7:32

the we do wanna hear little bit more

7:34

about your method and and maybe a little

7:36

bit about why some people have been upset

7:39

and Juri seen it is controversial in a

7:41

way that Melissa really. Slowly and let's talk

7:43

about that method. Sync your a chemist and a

7:45

physicist right? What was it a made? Was it

7:47

your time at Nature is an editor's in and

7:49

you did that for quite awhile? Was it those

7:52

experiences or what was? It is sort of first

7:54

planet that see the gets you thinking about these

7:56

things. With. Us right on. So my

7:58

first degree was in chemistry and then. Kind

8:00

of switch fields and went into condense

8:02

metaphysics. So a you could say my

8:04

qualifications for writing about biology a close

8:07

to zero. As a chemist, you come

8:09

across some of these ideas you know

8:11

you come across the ideas about for

8:13

example, the way proteins were. You know

8:16

what these molecules looked like, the way

8:18

they interact. but very much for the

8:20

canvas point of view. So yes, it

8:22

was the site that I spent years

8:24

as an editor at Nature. This the

8:27

science journal which exposes in those days

8:29

is is. Back in the late nineteen

8:31

eighties, early nineteen nineties, Nature wasn't this big

8:33

publishing empire that it is now. it was

8:35

just a journal. and it was a journal

8:38

with very small south. So it meant that

8:40

he spoke to everyone handling every subject you

8:42

came across. Everything. That was why it wasn't

8:44

a fantastic. Such an exciting place to be

8:47

on. It meant though there were a lot

8:49

of very steep learning curve said I had

8:51

to go off the in order to get

8:53

some kind of handle on a lot of

8:56

this stuff because as an editor I was

8:58

handling papers in biochemistry. and by. Physics as

9:00

well as in straight physics, material science

9:02

and so on. so I had to

9:04

learn a lot there. But also I

9:07

was good daily hearing about the latest

9:09

things that were happening. A bar with

9:11

it's trying to make some sense of

9:13

them are being able to talk to

9:15

colleagues. Do it, At least get some

9:17

handle on that. That was what really

9:19

not just stay something of an education

9:21

in biology but also made me aware

9:23

of some of the cutting edge issues

9:26

in biology gadgets. A link in the

9:28

bookie write something about the the Went

9:30

Jeans. With those a particular inspiration and

9:32

if the answer is yes but to

9:34

talk about what those scenes and what

9:37

they're involved and they seem to me

9:39

to be a very good example of

9:41

the way of the way that we

9:43

understand. James has changed over the past

9:46

several decades said the wind genes that

9:48

their genes that are involved. Really. I

9:50

think all we can say about them

9:52

is their genes that have roles in

9:55

our development in our development from an

9:57

embryo to are you know to a

9:59

baby. We can be no

10:01

more specific about it than that

10:03

because they crop up in all

10:05

sorts of places and if you

10:07

look into the name it's a

10:09

kind of portmanteau may Bavaria things

10:11

including they began as genes of

10:13

are identified in that prove rise

10:15

in for sophal us were a

10:17

mutation of the wind Jane created

10:19

flies the has no wings so

10:21

the W N as for wingless

10:23

and in a so the idea

10:25

was that the natural assumption at

10:27

that point would have been. Were

10:30

maybe these genes seasons fly genes that

10:32

has something to do with making wings

10:34

and innocence? They do clearly.this absolutely not

10:37

their function because we have dreams like

10:39

this as well and you know love

10:41

be. Hope we don't have wings so

10:43

they do something else as well. In

10:46

fact it turned out our version of

10:48

the genes were discovered in a completely

10:50

different context in some other developmental process

10:52

and they were given another name. And

10:55

then people realized hang on this gene

10:57

seems to actually be the same as

10:59

or and the human equivalent of what's

11:02

in fruit flies. So what's really going

11:04

on here? what do these things really

11:06

doing and then they crop up Indiana

11:08

Lots of other different developmental process is

11:11

because they are example in there are

11:13

other genes like this. Sonic Hedgehog is

11:15

another was my favorite that has absolutely

11:17

I have it in okay with that

11:20

name for and you know there there

11:22

again is another interesting kind of etymology

11:24

of how he got that name. but

11:26

you know their these genes that just

11:29

seem to have many. Different roles

11:31

in development processes and in a

11:33

way that's not the they do

11:35

anything. They're almost like general purpose

11:37

genes that development use as if

11:40

you like that ourselves use in

11:42

order to make different sorts of

11:44

body structures. A So it's a

11:47

reflection of the fact that there

11:49

are lots of things that we

11:51

have that you can't assign specific

11:53

tasks to. You can't draw a

11:56

line granny from the teen in

11:58

our genome to to. Treat

12:00

some developmental seen a to meet you

12:02

know, somebody safe or whatever. The that's

12:05

not the way it works so there

12:07

isn't a sort of planned rarely. That

12:09

does, from the genome to the

12:12

phenotype. Something else is going on and

12:14

these genes the way I talk about it

12:16

in the book is that is better to

12:18

see a lot of them as just resources

12:20

of a very general thoughts that the cells

12:23

can draw upon in order to do the

12:25

things they do to make us. And

12:27

our beautiful i want to echo at

12:30

Marty said about Justice loving a book

12:32

yeah I had a sunny feeling reading

12:34

it as you know in each chapter

12:36

thinking okay I know if chapters about

12:38

and then suddenly feeling like wow the

12:40

something like really new here that I

12:42

didn't expect. like the chapter on protein

12:44

functions are parties come about, unfold and

12:47

and do the jobs they do. And

12:49

I was thinking about this in relation

12:51

also to just the basic teaching a

12:53

biology which I feel unsatisfied about. I've

12:55

been quite unsatisfied with my own teaching.

12:57

A Biology and I think many, many university

12:59

courses restructured in a way where it's just

13:02

kind of a slog through a bunch of

13:04

facts that. That. We know in that

13:06

have been known for a long time and I

13:08

thought reading your book that they would be a

13:10

really inspiring thing for students to have a book

13:13

like that and to have the course follow the

13:15

progression of that book because it's you know it.

13:17

It just pushes you so rapidly out onto the

13:19

edge of where are the interesting questions and what

13:22

are we in a won't let me think about

13:24

next So I guess my question is did you

13:26

have that in mind when you're writing this and

13:28

you envision it being used for teaching and any.

13:32

I. Would be delighted if it was used

13:34

for teaching. And you know one of the

13:36

things that are obviously the I wanted to

13:38

do was to try to bring up to

13:40

date the stories that we tell about the

13:42

different levels of what's going on in biology

13:45

from Dna to our innate broke into someone's

13:47

house Rt and I'm so pleased that you

13:49

say that that was your experience because it

13:51

was very deliberate that for each chapter yet

13:53

it works in a way that could sound

13:56

very dry and tix with a but i

13:58

hope doesn't turn out that way. It

14:00

works through the different levels of biology

14:02

from starting with jeans with Dna, getting

14:04

to iron, A, going to proteins, going

14:06

to in a network, and cells and

14:08

so on. But at what I wanted

14:10

to try to do with this show

14:12

house each of those levels. A.

14:15

Any to those levels, Something significant has

14:17

changed over the past ten twenty years

14:19

or so in the way we think

14:21

about what's getting on. so you know

14:24

the the standards. Think that sunni the

14:26

school kids at automated and agree to

14:28

talk is that it of we have

14:31

these genes. He include proteins, the proteins

14:33

of the enzymes. that kind of some

14:35

have put us together on this is

14:38

how it works and that story isn't

14:40

wrong, but it's far more complex than

14:42

that and it's not so linear as.

14:44

That and also I mean as he

14:47

either you mentioned proteins This was a

14:49

real revelation to me on this was

14:51

something that was brought home during that

14:53

time I spent in twenty nineteen at

14:55

Harvard Medical School that I had as

14:57

a chemist. I had this idea that

14:59

just very neat and intuitive that we

15:02

know these cells are full of molecules

15:04

in other thousands of different proteins in

15:06

every cell. How on earth do they

15:08

ever find the right targets and do

15:10

the right thing without getting distracted by

15:12

all this other stuff? And the idea

15:14

is. That there's this molecular recognition

15:16

whereby eat protein as a particular site.

15:19

That means it sits the target molecule,

15:21

that it's meant to fit and ignores

15:23

all the others because they're the wrong.

15:25

Say yes, that that's the iconic vision

15:28

that we all have, right? Absolutely yeah

15:30

of the of that to in a

15:32

recent wrong there at protein to work

15:34

that way. Lots of enzymes do work

15:37

that way, but lots of them don't

15:39

and all hub in our really had

15:41

no conception of this until a few

15:44

years ago and. It was a

15:46

revelation that sleep there are plenty

15:48

of proteins particularly in ourselves or

15:50

in this House of Lords. Creatures

15:52

like our Sarah many more proteins

15:54

of they sought in law screeches

15:56

than in smaller ones and certainly

15:58

than in bacteria that. Don't

16:02

have a nice fluffy they won't

16:04

the break it is to intrinsically

16:06

disordered owned a country based upon

16:08

this picture because it means because

16:10

her coffee we're currently shutters indiscriminately

16:12

sticking to thing the fair promiscuous

16:14

I've added for so they were

16:16

by and him up for different

16:18

things have happened after hat work

16:20

at your hobbies. Proteins that you

16:22

know that not selective in this

16:24

way. And not only that it's

16:26

not a so this is just

16:28

something that by what he has

16:30

been forced to do because it

16:32

can't make proteins in a specific

16:34

and often structured enough we know

16:36

that he can because twenty all

16:38

I batted. In fact most of

16:40

the proteins he bacteria on like

16:42

that. So during the course of

16:44

evolution as organisms got more complex

16:46

it seems that the proteins many

16:48

of the protein for got less

16:51

structured and more promiscuous. Why is

16:53

that? How does that work when

16:55

they don't dismiss more complex and

16:57

that's one of those send to

16:59

I think one. Of the central

17:01

themes throughout the book because it

17:03

points to a different kind of

17:05

set of operational principles at the

17:08

molecular level that involve this promiscuity

17:10

of molecular interactions and what tends

17:12

to happen is rather than isn't

17:15

a good for logic of this.

17:17

Speaking to that. We have

17:19

groups of things that all kind of

17:21

speak. To each other in some way

17:24

and they get together. And these groups

17:26

in various ways. right? Brain is much

17:28

more smeared out. Logic? Yeah, absolutely. As

17:30

so I talk about it is kind

17:32

of committees of molecules and you know

17:35

they're all sorts of process is crucial.

17:37

Processes in ourselves particularly have genes gets

17:39

switched on and off that rely on

17:41

these committees where the molecules. Are all

17:43

kind of speaking to each other in

17:45

fairly indiscriminate. Ways of more or less

17:48

discriminate and somehow out of that

17:50

process just as out as often

17:52

to the committees that we make.

17:54

A decision arises as a decision

17:56

right. Turn this gene off, Turn

17:58

it on. Do that. Do that,

18:00

but it's not anything that you

18:03

can attribute to a nice clean

18:05

digital. Logic of one molecule speaking

18:07

to another. Yeah. There are

18:09

a monitor sorry to hear about in

18:11

of the title of your blood which

18:14

I met proteins and I could infer

18:16

how that works. but your book is

18:18

beyond what one might initially assumed to

18:20

come from a book called how Life

18:23

Works as you just represented the novel

18:25

ways that with come to understand protein

18:27

function you alluded briefly to the novel

18:29

ways that genes operate relative to the

18:31

classic ways of the ways of this

18:34

may Art teachers them for talks and

18:36

is biology classes. But when you

18:38

when you titled the book How Life Works,

18:40

it's not what you meant something. Broader? maybe?

18:42

Let's start with your definition of life

18:45

because life also has the evolutionary dimensions

18:47

mingle and one other things as distinguishes

18:49

about life evolves. So how do you

18:52

define life? You quoted francoise zip code

18:54

saying that living organisms of the site

18:56

of a triple flow matter, energy and

18:59

information that are abstract things that you

19:01

return to them over and over again.

19:04

When you're with height of the book this how life worth. How

19:06

did it sort of include evolution and had a

19:08

the goal is sort of comes together to tell

19:10

it the way we think about. like generally. Yeah.

19:13

We're sisters. This is the biggest active ago question I

19:15

know that's a big was I'm I'm A, I'm in

19:18

her. First of all I have to say. Giving.

19:20

The book this title with an act

19:22

of incredible hubris and I hope it's

19:24

gonna be say the Friday's hugging see

19:26

because you know what are Vegas to

19:28

pray But you're gonna say in the

19:30

book this is how wife was, sit

19:32

back and alone are. Actually I hope

19:34

it becomes clear that my aim is

19:37

is to say we don't understand how

19:39

life works. You know there's so much

19:41

we don't understand about it but I

19:43

think we can safely say now but

19:45

it doesn't work the way we thought

19:47

it did or least our life because

19:49

a lot of what I'm talking. About

19:51

as I sort of, you know dried

19:53

already a lot of what I'm talking

19:55

about. a price to us as modes,

19:57

complex organisms so you know and one

19:59

of the key Id in the book

20:01

and this again was a revelation to

20:03

me is that the way we work.

20:06

Doesn't. Seem too often

20:08

have the same basic principles as

20:10

the way that here world often

20:12

we study bacteria were understandably because

20:14

and much simpler that single celled

20:17

organisms you know you consider. See

20:19

him to the much more plainly

20:21

said we've study then as a

20:23

first step and they often assumed

20:26

and you ventured Francois Sack of

20:28

you know that Jack of Amano

20:30

were the ones who first talked

20:32

about gene regulation in the Nineteen

20:35

sixties and the assumption. With lung

20:37

made that the way they explained

20:39

it is probably get as the

20:41

similar in humans as it turns

20:43

out that it's not. that I

20:45

see the molecular principles of gene

20:47

regulation are largely different enough so

20:49

that was one of the key

20:51

messages that actually we can't generalize

20:53

often for bacteria to us there

20:55

are some basic things had a

20:57

similar of course we all have

20:59

Dna, we'll have our and I

21:01

will have proteins it as France

21:03

is correct. Central Dogma is kind

21:05

of basically. Still the same all

21:08

along, but the real. Principles.

21:11

By which our cells work on

21:13

the same as those and bacteria

21:15

so that was one of the

21:17

key messages. How life works is

21:20

not a single question and how

21:22

our life works is not the

21:24

same desire bacterial life was inmates

21:26

t respect.e of the question as

21:28

well. What is life Anyway,

21:31

in a what are we talking about

21:33

here? That's actually something that I sidestepped

21:35

in the books. I say I up

21:37

front that people like in a from

21:39

Jbs How Dying To Earn Shrouding Ass

21:42

and as a lovely recent book by

21:44

pool nurse as well it's all a

21:46

Cold War his life and none of

21:48

them on cigarettes A thousand is the

21:50

wisest fake as he begins at the

21:53

very first sentence in that book or

21:55

our essay is I'm not going to

21:57

answer this question and you know that's

21:59

right, Because there is no consensus about

22:01

that, there's a lovely but By tells

22:04

him a good life said was explore

22:06

that question and can't rightly points out

22:08

in a we don't know net net

22:10

there is no agreement. basic rights that

22:12

so the approach zeit of these well

22:14

I don't have to answer that question

22:16

in a sense because I'm talking about

22:19

we know the were alive, we're form

22:21

of lies had a we work is

22:23

rarely what I'm talking about but inevitably

22:25

and trying to answer that question. If.

22:28

I do have to come back to the

22:30

question of what what is it that is

22:32

going on it which he really is about.

22:35

You know, what is it is going on

22:37

in life. So you do have to take

22:39

a step back because all of these complexities

22:41

are set. You know there's some from brakes.

22:44

It's so extraordinary. That you have as

22:46

many different levels from seems to proteins

22:48

to that was the cells to tissues.

22:51

That somehow, even though

22:53

they have different operational

22:55

principles themselves, somehow they're

22:57

all operating together. In.

22:59

Ways that support each other to build

23:02

something. So what's keeping the show on

23:04

the rise? What is it over all

23:06

that life is doing and that led

23:09

to some questions that really go. Yeah,

23:11

we certainly go beyond the molecular specifics

23:13

and you get into questions of what

23:15

is it that life is if you

23:18

like trying to do and we get

23:20

to this question of agency. So I

23:22

have a chapter towards the end of

23:25

the book on agency and really, I

23:27

think the key point I wanted. To

23:29

make there is it's a real question

23:32

is one that biology has.it's one that

23:34

ballsy still seems to be uncomfortable about

23:36

because you have to start talking about

23:38

things like function and even purpose which

23:40

I eat out to do Words I

23:43

have often be takes to village of

23:45

Biology but you really have to think

23:47

about those if we going to grasp

23:49

agency. and I think what Biles he

23:52

needs is a proper theory of agency

23:54

and there's nothing of that sort of

23:56

the my mom. Mass for

23:58

beautiful and me couldn't agree. I

24:01

want to just continue on this feet. So

24:03

you know if we think about agency and

24:05

causation at different levels, what I hear you

24:07

saying is that as you move from bacteria

24:10

to more complex you coyotes and multicellular organisms

24:12

you get a shift in the the sort

24:14

of Los I have causation and the Los

24:16

I have agency. So for example antibacterial level

24:19

you might think of the lack opera on

24:21

and Nikolai as a sort of a gentle

24:23

circuit right said in a road very real

24:26

sense is making decisions about what sorts of

24:28

sugars are available and what sorts. Of

24:30

ways it should retool it's biochemical machinery

24:32

to use that sort of cigarettes a

24:34

very generic kind of based. Locus

24:37

of Causation. And I think what you're saying

24:39

is that as you get more complex animals

24:41

like us, those Los I a current other

24:43

levels. so maybe let's just be more specific

24:46

about that. What levels to be a crowd

24:48

and what prophecies are you talking about? Yeah.

24:51

Whoop. This was another kind of

24:53

penny dropping when I was in

24:55

a struggling to figure out what

24:57

the structure, what the general theme

24:59

of this book was. The issue

25:01

of causation, I think is an

25:04

absolutely crucial one. And there's this

25:06

idea that has been talked about

25:08

for a long time, but often

25:10

in very vague ways. the notion

25:12

of emergence and you know, emergent

25:14

systems. and it's often illustrated with

25:16

reference to things like flocks of

25:18

starlings or even road traffic. Where

25:20

you get structures. And patterns that

25:22

can't be deduced by looking at the

25:25

individual components of the system. You can

25:27

only see them as they emerge at

25:29

some higher levels. And this is something

25:31

that I say it's familiar in physics

25:34

is being familiar for a long time.

25:36

In a sense, what we call phase

25:38

transitions are examples of emergence. That's there

25:41

is nothing in a water molecule that

25:43

will tell you the water has three

25:45

different phases gas, liquid and solid and

25:47

that their as jobs switches between them.

25:50

These are cooperatives things. That happen between

25:52

many water molecules. Phase transitions are

25:54

emergence and ominous. So it's a

25:56

real thing that happens is certainly

25:58

in nature. We see it

26:01

also in organic nature in life, but

26:03

it's very hard to sort of pin

26:05

down. But one of the aspects of

26:08

that notion of emergence is what some

26:10

people to talk about as causal emergence.

26:12

And here again it's become possible to

26:15

quantify this to get series to understand

26:17

this, that there are some complex systems

26:19

and we seem to be one of

26:22

them and things like the brain or

26:24

also one of them were. It turns

26:26

out that that never ways you can

26:29

measure the amount. Of causation that's happening

26:31

in a complex system at different levels,

26:33

at different levels of magnification if you

26:35

like. And it turns out that there

26:38

are some systems where the causes of

26:40

the overall behavior of the system are

26:42

located much more in the higher levels

26:45

of the system, the bigger scale things,

26:47

and in the smaller scale things as

26:49

this is the idea of course, on.

26:53

Of this seems to be remade it's

26:55

it's be measured in living things at

26:57

it seems that they're absolutely is a

26:59

degree of causal emergence. In living

27:01

things At once again, there's

27:03

a difference between simple living

27:06

things are bacteria and complex

27:08

organisms. Air is more as

27:10

he would probably intuitively expect,

27:12

but you can quantify. there

27:14

is more quarterly migrants and

27:16

complex creatures White House which

27:18

means the causes of our

27:20

behavior are located at higher

27:22

levels organization than for example,

27:24

the genome. So. There are

27:26

many things that that happened where

27:28

you cannot say can't point to

27:30

a gene or even two or

27:32

three jeans and say these of

27:34

the causes of this is what

27:37

we've known as certainly in Juno

27:39

makes for a long time that

27:41

it's that. The notion for example

27:43

that if you try to identify

27:45

which genes or was gene variants

27:47

are correlated with particular trait like

27:49

height or like intelligence or like

27:51

obesity for example if we're thinking

27:53

about either did he did you

27:55

find out. That as most of the

27:57

genome, right? Absolutely Yes. So a hit

27:59

us all. Regina, what does that

28:01

may? Well, you know. one way of

28:03

thinking about it is well people say

28:05

was that all the genes are somehow

28:07

causes but that doesn't really tell you

28:09

anything that doesn't sort of mean anything.

28:12

I think all that's really telling us

28:14

is that the truth causes for those

28:16

kinds of traits. Happen at

28:18

a higher level and what you

28:20

can see and that the genes

28:22

are still affecting them, influencing them

28:24

in some way but always seeing

28:26

in as genomic carnations all the

28:28

echoes is rarely of causation happening

28:30

at higher levels. Miss any means

28:32

that if you want to make

28:34

interventions as we want to in

28:37

medicine that there were plenty of

28:39

friends that have some fanatic component

28:41

thanks to spend every time we

28:43

have or something that compartment but

28:45

this cannot be fundamentally cannot be

28:47

addressed or intervened. In the genetic

28:49

level, not just because they're too many

28:51

genes involved at because that's not where

28:53

the causation lies in a we see

28:56

this a lot for example with Cozad

28:58

that actually you know the problematic cases

29:00

of cove it what seem to be

29:03

happening to cause problems wasn't something genetic

29:05

even though some people seem to have

29:07

more of a genetic propensity to have

29:10

a bad rash. And to go with

29:12

the my case the level of the

29:14

immune system. and in fact you know

29:17

Tanzania and this is something that has

29:19

been had been a recognized for a

29:21

long time and biomedicine. The immune system

29:23

is such a locus of causation for

29:26

so much that happens to us, even

29:28

things it doesn't seem obviously connected to

29:30

information and immune response, it's a massive

29:33

locus of causation. and so if we

29:35

want to intervene in those sorts of

29:37

conditions that we shouldn't be looking to

29:40

find a genetic target or a protein

29:42

target for a drug to hit, we

29:44

got to find a way of intervening

29:47

that is going. To alter the way

29:49

the immune system does stuff. so we

29:51

need to intervene at a higher level

29:53

of causation. So that's what I mean

29:56

by cause, will emergence and also why

29:58

I think it's an important. The

30:00

biology and buy medicine. And

30:11

it will circle back to her five medical

30:14

implications of the book in a bit. Being

30:16

a bit of an immunologist and especially intrigued

30:18

to talk about these kinds of things the

30:20

before we leave it enters Touch on Agency

30:23

is are brought up. What do you think

30:25

about the selfish Gene concept as I want?

30:27

I want to talk about your book in

30:29

the context of evolutionary theory or. You.

30:32

Know modern understanding of how life works,

30:34

what it means, for how we think

30:36

evolutionarily? How does the self esteem concept?

30:40

Where I'd always have this struggle with

30:42

the notion of selfish genes because you

30:44

know it's clear I think to to

30:46

every who hunted by him as he

30:48

that our genes have to operate cooperatively

30:50

in order to be a part are

30:52

not going to say to build because

30:55

then static us right way to look

30:57

at it. But to be a part

30:59

of you know an organism that enables

31:01

the evolution to happen at all. So

31:03

to be viable they have to cooperate.

31:05

They have to do all their respective

31:07

jobs at the right place and time.

31:10

You know in relation to one another. And

31:12

in fact the whole selfish gene idea isn't

31:14

about what the genes the during, it's about

31:17

what different variants of particular James the doing

31:19

important different alliums A doing so. There is

31:21

a meaningful sense if you think about population

31:23

by with you there is a meaningful sense

31:26

in which we can think of different

31:28

alley, a list of a given g as

31:30

being in competition with one another you know.

31:32

and if you like being selfish because you

31:35

know it is a bit of a zero

31:37

sum game that you have one of

31:39

those alley. Else is fucking if

31:41

he likes it. To put it

31:43

that's remotely is trying to outdo

31:45

the others so I I totally

31:47

understand. You know why that picture

31:50

make sense. In terms of evolutionary

31:52

population biology, it doesn't make sense.

31:54

It is incoherent from the point

31:56

of view of thinking about genetics

31:58

from a different. Mental Defective and

32:01

developmental biologists have felt this way forever.

32:03

Rarely you know bank. Certainly banks don't

32:05

know what into this has been us

32:07

a problem that they have. So one

32:09

thing that I talked about in the

32:12

book is that there is this at

32:14

least as conceptual difference between the notion

32:16

of a gene in evolutionary biology and

32:18

in developmental biology and is always been

32:20

hard to reconciled as to an insight.

32:23

Perhaps I can't be reconciled because we're

32:25

talking about genes in different contexts that

32:27

way. but what I wanted to try

32:29

to do here I kind of am

32:31

sensing at it would have been easy

32:34

in a way to have simply attacked

32:36

the notion of a selfish gene. from

32:38

this point of view of enough you

32:40

think about it about mentally it makes

32:43

has since But I i thought well

32:45

it really is a useful idea to

32:47

evolutionary in a to desist of use

32:49

it all the time. So what is

32:51

it really expressing. And a it

32:53

seems to me that it's. Not a

32:56

metaphor for what genes are of

32:58

what foods do, It's a metaphor

33:00

for the models they used in

33:03

evolutionary biology to understand that particular

33:05

aspect. And those models don't? I

33:08

mean, you know, I've spoken to

33:10

Evolution Policies who sets a says

33:12

models don't really recognize organisms as

33:15

such at all, and either Richard

33:17

Dawkins talks about the organism is

33:19

simply a vehicle for the genes.

33:22

That notion, it seems nice, almost

33:24

antithetical to. Eat a one star

33:27

with is trying to do to

33:29

understand organisms in there and right

33:31

into some respect. Organism said, there

33:34

are right, but it is a

33:36

viable enough picture if you're thinking

33:38

about populations of different alley ales

33:41

and how those in a chain

33:43

three to three times south. Really

33:45

the selfish gene notion? It's a

33:48

metaphor for the models that evolutionary

33:50

genetics uses to understand how populations

33:52

of different alley or change over

33:55

time. So that's fine, but it's

33:57

really important I thanks to recognize

33:59

that the. What It's doing.

34:01

It's not a metaphor for what

34:03

seems all of a what Genes

34:05

do. It's a metaphor for that

34:07

particular model of evolutionary biology. And.

34:10

I never thought of it that way. Others

34:12

Really interesting. Another word that we've already said

34:14

multiple times here is agency and I think

34:16

it's worth maybe being also a little more

34:19

explicit about what you mean by this word

34:21

agency, which we hear increasingly in the scientific

34:23

literature. It feels like sort of an interesting

34:25

moment for this as an idea, but to

34:27

you, what is That was an important. Well.

34:30

I, I think I'd give a

34:32

definition of agency as opposed to

34:34

life. I'd say something along the

34:36

lines that an agent is an

34:38

entity that is able to act

34:40

on itself and on it environment

34:42

in order to achieve. Self.

34:45

Directed of self determined guns. So

34:47

an agent is some entity that

34:49

has goals for a start. and

34:51

there goes that. I mean, there

34:53

are various ways that they could

34:56

be set. You know. I I

34:58

think goals for organisms are set

35:00

by evolution is so either evolution

35:02

is a process that produces goal

35:04

oriented things. Evolution itself. the process

35:06

of evolution, as far as we

35:08

know, has no goal. There's no

35:10

obvious reason why we should think

35:13

of evolution as having us I

35:15

target. Or at direction or anything.

35:17

Some people have argued that either

35:19

they're always a week. That might

35:21

be the case. I that's an

35:23

interesting debates.we don't particularly need to

35:26

get into that to understand agents.

35:28

it's simply that evolution create goal

35:30

oriented entities. And it's it's It's

35:32

amazing To uncontroversial it we have

35:34

no problem with the fact that

35:36

we are goal oriented beings and

35:39

the goals that we have a

35:41

often We kind of here that

35:43

if we admit that living. Things

35:45

have goals, their survival and reproduction. and

35:47

you know that I often. that's the

35:50

case. that pseudo that gets you a

35:52

long way, but there's no way that

35:54

we can explain everything that we do.

35:57

In those terms other than

35:59

with some kind of evolutionary

36:01

psychological you know just says

36:03

story with sometimes happens. Here

36:06

I mean, if is like you know, I mean

36:08

one way to get around that is to say

36:10

you know there's his prime goals which our survival

36:12

and reproduction. and then there's a bunch of subsidiary

36:15

goals that contribute to that. And. You know,

36:17

life is an elaboration of a lot of

36:19

those subsidiary goals I wanted to ask a

36:21

been like to me that idea. The agency

36:23

becomes really interesting when we think about. Agency.

36:26

Occurring at different levels simultaneously.

36:28

So, for example, Large.

36:30

Multi cellular animals like myself? How. Golf.

36:33

And purposes. I'm an agent, but each of

36:35

my cells also you could think of as

36:38

being an agent, right? So we have sort

36:40

of nested levels of agency, right? And and

36:42

I guess that bronze out this idea of

36:44

agency and an interesting way. And it is,

36:47

or a sort of general way to think

36:49

about agency across all of those levels simultaneously.

36:52

I. Think the simplest the that

36:54

is if there isn't ours does that.

36:56

I don't know it, but I think

36:59

that that is as a really important

37:01

and interesting question. You know, add one

37:03

that informs all sorts of other questions.

37:06

Or how is it that if

37:08

we recognize that every and I would

37:10

argue that every living cell is an

37:12

agent? In some sense even bacteria have

37:15

a kind of agency. How is

37:17

it that multi cellular creatures are viable?

37:19

It's all in a rather than just

37:21

being. Torn apart by the agency

37:23

evil their part of a you could

37:26

say this is Richard Dawkins is talked

37:28

about the paradox of the organism that

37:30

he's talked about that from a gene

37:32

centric view which I find harder to

37:34

understand but certainly if we think about

37:36

it and from the the the point

37:38

of view of cells, the agents and

37:40

there is a sort of paradox as

37:42

you know how that works but it

37:44

is one that I think either we

37:46

can think about and start to understand

37:48

but it of we are collective agents.

37:51

narration see as corrective. In a big

37:53

part of our agency of course comes

37:55

from our complex commission and eat. A

37:57

One thing that I've argued a factor

37:59

they argue dated my previous book in

38:02

the book of mine's is that are

38:04

you know I would say I mean

38:06

aren't you talked about of having it

38:08

out and this of overarching goals, reproduction

38:10

and survival and then we should have

38:13

do other things and racing to that?

38:15

I would argue that minds ah, we

38:17

have minds because we are as complex

38:19

creatures. There is no way that we

38:21

can predict what we going to face

38:24

tomorrow or in the next moment. Our

38:26

behavior and our environments is just too

38:28

complex to have any sort. Of hard

38:30

wired solution to everything that we

38:32

might face. Bacteria are much simpler

38:34

and that can have a more

38:37

automated response although even they don't

38:39

have any toilet and I think

38:41

brains are evolution solution to that.

38:43

That instead of giving us some

38:45

you know hardwired response to every

38:47

situation or even instead of giving

38:49

us some computer because I don't

38:51

think the brain meaningfully as a

38:53

computer that kind of some have

38:55

computes what we have to do

38:57

next. It wouldn't have the time.

39:00

To do that it's no guns that

39:02

uses rules of thumb rarely Yeah to

39:04

do to do something that we have

39:07

found through trial and error, through experience

39:09

and through some degree of and eight

39:11

nests to be usually good enough to

39:14

be good enough to two hours to

39:16

get by and. What that

39:18

ends up doing is giving us

39:20

more innocent, more cognitive capacity. The

39:22

we would seem to really have

39:25

any need for steps. What is

39:27

they? Evolutionary of function of being

39:29

able to devices? Theory of General

39:31

Relativity? Why on earth do we

39:33

do that will? It's because in

39:35

order to have these brains that

39:37

can function well enough in our

39:39

environment to give it says it's

39:42

capacity as doing these things that

39:44

seem to have no evolutionary benefits

39:46

and in fact some things. That

39:48

seem to be counterproductive. Get a

39:50

non adaptive and that's just what

39:52

minds are like. But I think

39:54

in arguing the book that actually

39:56

when we start to think about

39:58

what agency rarely is. One agency

40:00

requires it requires things like

40:02

memory. It requires things like

40:04

having some sort of internal

40:07

representation of your environment so

40:09

that you can anticipate what

40:11

you might find when we

40:13

start to think about it.

40:15

That way, we have to

40:17

start thinking of every living

40:19

thing, down to single celled

40:21

organisms as innocent cognitive agents,

40:23

not just stimulus response machines.

40:25

That own life is cognitive.

40:28

At agreed and in of that sort

40:30

of foreshadows are questions to you about

40:32

Mike Levin's work, but let's hold off

40:34

on those for just a second and

40:36

stick in the spaces in a why

40:38

agency. And then I think you've articulated.

40:40

Some. About the utility of

40:42

agency but what are they

40:44

come from? So you know, art

40:47

raised the issue of conflicts across levels.

40:49

but where did it start? Added a

40:51

got going: Is it heritable that even

40:53

makes sense to ask that question? Is

40:55

it sort of variable among individuals and

40:57

a population Is our way to merge

40:59

these concepts of these the sort of

41:01

frameworks really? Yeah. And

41:03

these are absolutely the questions that

41:05

should motivate Having a theory of

41:07

agency said that we can get

41:09

some handle on them on a

41:12

where did it come from? I

41:14

think that actually eight correlates completely

41:16

with with living things. and actually

41:18

I don't think anything can be

41:20

truly alive if he doesn't have

41:22

agency. I don't think necessarily the

41:24

converse is true. I think that

41:26

we may end up making genuine

41:29

agent show machines A I basically

41:31

might already have some. Degree of Asian

41:33

say it might already be setting his home

41:35

goes to some degree. so you know I

41:37

don't think the only living things can be

41:40

agents although at the moment I suspect of

41:42

living things are are genuine agents. But that

41:44

may change the future. But I do think

41:46

that know living thing cannot be an agent

41:49

that everything in life has been. I did

41:51

so we have. What that means is that

41:53

in order to I'm in the origin of

41:55

life is complex enough already. Okay without introducing

41:58

agency. but I would hope that I. We

42:00

by introducing agencies we can focus like

42:02

Christian a bit more because you know

42:04

so often discussions about the to the

42:06

the origin of life they they might

42:08

start of listing various things, that living

42:10

thing, how to be any good and

42:12

to get a reproduce have to be

42:14

metabolized. it's just that a certain kind

42:16

of shopping list that you know if

42:18

it no one agrees on and that

42:20

might see more or less arbitrary but

42:22

I think that the to have a

42:24

genuine living fake you have to have.

42:27

Created. In some way, agency

42:29

and so fully understand what is needed

42:31

for agency. And you know, as I

42:33

say, I've mentioned some of them, I

42:35

think it does need some sort of

42:38

memory. They're out of physical series that

42:40

suggests the. Only by

42:42

having memory and by using that to

42:44

create some for representation of the environment

42:47

only systems right? That can be some

42:49

a dynamically efficient. Otherwise, I made

42:51

it through the speaking at even literally

42:53

speaking. Otherwise you just bumping into stuff

42:56

all the time because you're not anticipating

42:58

what's coming into. That's very inefficient.

43:00

So we can start by thinking about

43:02

what agency is and what it requires.

43:05

Breaking it down, we can start to

43:07

formulate some questions about what would have

43:10

been required for life to begin. That

43:12

it outside the normal ones? Have

43:14

you know have you made replicating

43:16

molecules? howdy my dna and settles.

43:18

Yeah. Do you think that

43:21

agency is something that we can

43:23

directly measure? Or is it one

43:25

of these more abstract kind of

43:27

things like fitness that we know

43:29

is really important but takes lots

43:31

and lots of different forms and

43:33

is context dependent and mean. Will

43:36

we ever had an agent amateur

43:38

Fat Yeah. Great question and I

43:40

can't answer that with confidence. I

43:42

do think that it will be

43:44

possible to. An atomizer agency

43:46

to say was this is you know,

43:49

as I should have hinted that Asians

43:51

have to have these particular characteristics. I

43:53

don't expect any kinda versions on exactly

43:55

what those need debates, and I think

43:58

it's quite reason suppose that things will

44:00

have degrees of agency in much the

44:02

same way as we imagine living things

44:05

have degrees of sentence, but I think

44:07

there has to be some agency as

44:09

I say for it to be alive

44:12

did. Over there, different degrees of agency

44:14

would probably also different types of agency

44:16

in much the same way as I

44:18

think we need to stop thinking of

44:21

consciousness as a single thing, like a

44:23

single you know fluid that we have

44:25

more or less all have different organisms.

44:28

I think there are different dimensions. To

44:30

consciousness I think there will be to

44:32

Agency says that some agents will be

44:34

very good at doing particular things. I

44:37

might have been a particularly good memories

44:39

for example, some agents might be particularly

44:41

good at actuating thanks. a lot of

44:43

been home to move of being able

44:45

to sense in certain ways so you

44:47

know I think we could break it

44:49

down and an atomizer. but whether we

44:52

could I ever really sort of quantify

44:54

that I'm agnostic about at this point

44:56

is why we need a theory to

44:58

to help us. Yeah. I've

45:00

been enough. understandable and it's also great. The

45:02

here caution You know the did not want

45:04

to go too far but as these ideas

45:06

had been and ass off for a long

45:08

time and and just started to come around

45:11

as we intend to formalize and you've used

45:13

the word a couple of times it's sort

45:15

of as conflicts with of the we're talking

45:17

about a minute ago or you I guess

45:19

youth implied that agency may be decomposed bull.

45:21

Is that what you mean A minute? If it

45:24

is sort is what Is it? A substrate of

45:26

emerges causalities to go back to what we are

45:28

talking about before any net raises the bar for

45:30

of measurement, doesn't it? Had we put these two

45:33

things together. Yeah well it does

45:35

except that I would hope that if we

45:37

can decompose the i feel we probably can

45:39

then perhaps we can quantify it a bit

45:42

better because I'm we can start to even

45:44

think about the individual components and again you

45:46

know I'm using memory because it said of

45:48

for as familiar wonder you we can kind

45:51

of measure the amount of memory that something

45:53

has and I should say in fact that

45:55

of better discussion than I'm going to be

45:57

a to give of what of how the

46:00

to and optimize agency and you know how

46:02

to think about eight in Tibet a discussion

46:04

is you can find it it in a

46:07

book called free Agents by the Irish Here

46:09

scientists Kevin Mitchell which I'd really recommend of

46:11

which I it's you know drill on for

46:13

quite a bit for my discussions of agency

46:16

we totally agree we just had Cabin on

46:18

and that a month ago process is a

46:20

great bus fare very good but yes so

46:22

I think we probably can't and atomizer. One

46:25

thing though I would mean this is Pat

46:27

scared to sad. More controversial is that's as

46:29

lied. To the notion of agency and

46:32

to the recognition that agents have purpose.

46:34

I think we need to be able

46:36

to start talking about meaning. And.

46:38

Living Systems and that that will send

46:40

a lot of people scuffling a fighter.

46:42

I know because assess as a spot.

46:45

Here's what I made by that because

46:47

I have the start of the.i say

46:49

that I think one way to think

46:51

about living things is that they are

46:53

creators of meanings. And what I mean

46:55

by that is that any living thing.

46:58

Is going to inhabit this environment

47:00

that is full of stuff happening,

47:02

full of what we might think

47:04

of his information. We know that

47:06

that that's the case. We have

47:08

all the sensory inputs coming towards

47:10

us. What a living thing has

47:12

to be able to do is

47:14

to celta that information to figure

47:16

out what matters for survival. it

47:19

as first and foremost of what

47:21

doesn't and different organisms have made

47:23

different assistance of our that so

47:25

that it as for us. Vision

47:27

is really important. Because that's in

47:29

the nature of our environments It as

47:31

for don't smell laser really important thing

47:33

for lots of creatures in the seats.

47:36

Didn't have a deep ocean vision isn't

47:38

gonna get very far because it's just

47:40

to.down as a it's have other senses

47:42

but they have different ways of filtering

47:45

that information but not as filtering it

47:47

but giving it some kind of valence

47:49

it out. How much attention do I

47:51

have to pay to this information? How

47:53

worried? If you like to put a

47:56

anthropomorphic they have where he should. I

47:58

be that I've just had this thing. Well

48:00

that signal how interested should I be

48:02

in it? So I think that this

48:05

is so that Living Systems games they

48:07

don't necessarily know those the doesn't have

48:09

to be any awareness, any conscious awareness

48:12

of that happening that they have to

48:14

have some system for creating a surveillance

48:16

to their response And that's what I

48:18

mean by meaning and enough they have

48:21

to be able to do that in

48:23

order to not be overwhelmed that in

48:25

order to not cannot promote of information

48:28

on store old that isn't going. To

48:30

be any use to them because

48:32

again, as inefficient how that is

48:34

very specific sense. I think living

48:37

things do create meaning from what

48:39

I experience. Great!

48:41

I have a question from the skeptics

48:43

corner and this comes from party Whether

48:45

other couples ten damper on I I

48:48

I sort of has. you'd ask this

48:50

question itself, but he's asked me and

48:52

Marty several times some hard questions about

48:55

what we mean by agency and his

48:57

take on it is. there is no

48:59

clear necessarily what the differences between agency

49:02

and just plain old phenotypic plasticity which

49:04

he spent a lot of time thinking

49:06

about, Lot of time studying and I

49:08

think you could argue that. You

49:10

know what are the systems that

49:13

instantiate this idea of phenotypic plasticity?

49:15

Their complex systems that are sensing

49:17

the world. And. Making decisions about

49:20

how the altar phenotypes across different spatial

49:22

and temporal scales from very rapidly to

49:24

very long term development on kinds of

49:26

changes and you know it's hard for

49:29

me to come back to camp and

49:31

say, well, I think agency is something

49:33

else and that so would you say

49:35

something different about that. Yeah.

49:38

That is very good question. I

49:40

guess it's not. Clear

49:42

to me. Where

49:44

if with simply thinking in

49:46

terms of phenotypic plasticity. Were

49:49

in that picture, were going to get notions

49:52

of purpose and goals It may be in

49:54

there may be the right is that I'm

49:56

not familiar enough with that way of thinking

49:58

to know that. But I. I feel

50:00

like that's the key thing that we

50:03

have to recognize with agents. We have

50:05

to think about them as having some

50:07

sort of goals that it internally set

50:09

and you know one reflection of that

50:12

is even for be different. Need some

50:14

sort of bank here and I suspect

50:16

roses the bacteria we can give look

50:19

look to be an identical population of

50:21

South. And. Identical stimulus and

50:23

I want or responded the same

50:25

way because I'm in now Be

50:27

Some to Cast is Dns. Some

50:29

of that will be random, but

50:32

some of that will be purposeful

50:34

in the sense that because I

50:36

had different histories they will have

50:38

different internal settings, little conditions, the

50:40

response that they give and I

50:42

think it's meaningful to talk about

50:44

that is those bacteria having different

50:46

goals which you know rationalize is

50:49

the different responses are they will

50:51

have so it seems. To me

50:53

that that's something that goes beyond

50:55

simply recognizing phenotypic plasticity in the

50:58

sense of recognizing will I can

51:00

be these differences Maybe it's really

51:02

about asking me why is that

51:05

what is driving in of causes

51:07

of those different responses and that

51:09

has to come down to some

51:12

notion of the system and making

51:14

a decision ready making decisions that

51:16

that are related to interview you

51:19

only make decisions if you Goals.

51:37

So we'd such done a consequences

51:39

of agency and assorted systems thinking

51:41

for how we should think about

51:43

problems and issues. and in medicine,

51:45

I think it's a good point

51:47

just to return to that. and

51:49

the point you're making it the

51:51

very beginning of our conversation was

51:53

that you know it's hard often

51:55

to trace particular medical situations to

51:57

particular Los I. And that's because

51:59

these. Los I of causation ertl was

52:01

I have agency or spread out across the

52:03

body Maybe let's talk about that in the

52:06

context of cancer. Yes I'm quite interesting things

52:08

that you say about cancer and you know

52:10

if we just or a step back and

52:12

say well what is cancer. It's

52:15

effectively cells that. Are.

52:17

Going rogue is in the sense

52:19

that they're giving up on this

52:21

common project of running an operating

52:23

a multi slater body and they

52:25

strike off on their own and

52:27

they become selfish. It becomes about

52:29

them and I think one way

52:31

to conceive of that is that

52:33

something about their a general decisions

52:35

their purposes have changed. So what

52:38

is it about writing this book

52:40

that influence in our other sort

52:42

a new horizons for how we

52:44

should think about the origins and

52:46

possible treatments of. Cancer. Yeah.

52:48

I think they're absolutely are. And I

52:50

think that one of the things that

52:53

seems to me to have happened again

52:55

over the past maybe ten twenty years

52:57

is that that picture that you've just

52:59

presented about the way to think about

53:01

cancer that that I think to has

53:03

changed. So this notion that is the

53:05

cancer cell is a rogue sound is

53:07

it has become selfishness during its and

53:10

things clearly cancer cells are in a

53:12

sense if you like and not cooperating

53:14

with the rest of the body but.

53:16

They aren't total individualists. It's

53:18

really, really striking that now

53:20

that we have the technologies

53:22

to be able to have

53:24

a single cell basis, look

53:26

at what is really going

53:28

on inside a tumor. We

53:30

find that actually, rather than

53:33

just being this undifferentiated mass

53:35

of proliferating cells, each of

53:37

them an individualist, it's more

53:39

like. And I use

53:41

this phrase. I think it is.

53:43

I have this phrase from Brad

53:45

Bernstein originally that it's more like

53:48

it rains recapitulation of development stuff.

53:50

Actually, to must have some characteristics

53:52

of organ. Sit there at different

53:54

types of cel within them and

53:57

they seem to be operating more

53:59

like a kind go crazy organ

54:01

than just a you know, a

54:04

massive individuals and even to the

54:06

extent that we see. Team.

54:08

As a Killer. Getting healthy

54:10

cells and including healthy cells

54:12

within the two months to

54:14

do things for that tumor

54:16

and do doing things. That.

54:19

They sort of do normally be to make

54:21

them to be developing in of blood surprise

54:23

for example you know the skin or as

54:25

a ton of the Dubai is really important

54:28

and that's one of these the things that

54:30

is often our tax to drive your tank

54:32

the demon. So I think the view of

54:34

cancer or you know has has changed in

54:37

that regard that it's perhaps better to see

54:39

it as a an aberrant form of development

54:41

rather than as in our on a Single

54:43

Help and his. But I also kind of.

54:46

I think it's more useful to see at

54:48

not as. So much as cells

54:50

that have totally gone rogue but

54:52

that south of have acquired one

54:55

of the many different possible state

54:57

that ourselves can form that it's

54:59

I think about it more in

55:02

terms of Waddington Screen this landscape

55:04

of possibilities. Time salute the the

55:06

way that Silva now being thought

55:09

of in terms of how they

55:11

find their fate sits on a

55:13

landscape which era face value seems

55:16

to be a landscape of enormous

55:18

complexity. Of multi dimensional complexity if

55:20

you think of how many it of

55:22

jeans we haven't habit a different types

55:25

of regulatory system we have that the

55:27

the possibilities for cel seem endless and

55:29

yet there seem to be only a

55:32

few different states have a for relatively

55:34

few and they seem to find them

55:36

quite sort of reliably and some of

55:38

those states will be ones corresponding to

55:41

to cancel like states and cells can

55:43

flip over into those and eat at

55:45

this is being sort of and analyze

55:48

now innocent. Of dynamical systems framework where

55:50

we think of in a one

55:52

of the different collective states as

55:54

the d network can form of one

55:56

of them have some of them

55:58

corresponds to these. The that we

56:01

we can go with cancer cells

56:03

and thinking about it that way.

56:05

I mean I his first saw

56:07

it. I think it creates more

56:09

realism about cancer because I think

56:11

drugs or is just a consequence

56:13

of being multicellular organisms. You know

56:15

every organism has some organisms, right?

56:18

Whales have better defenses against it

56:20

so they have less cancer. but

56:22

it's something that old multicellular organisms

56:24

are going to be vulnerable to

56:26

just as misfolded protein states that

56:28

give rise to things. Right in

56:30

a near degenerative diseases are attacks

56:32

against is having protein. This is

56:34

just something the proceeds will do.

56:36

and this means that we need

56:38

to think about cancer treatment listeners

56:40

something to be eradicated which is

56:42

just not possible for it. Instead,

56:44

if if we think about it

56:47

is wanting to guide ourselves to

56:49

stay on track to stay one

56:51

of these healthy valleys, adults go

56:53

over to one of the others.

56:55

And even to the extent that there are.

56:57

Now these approaches to treating Canseco differentiation

56:59

therapy were what you're trying to do

57:02

is instead of just blasting them and

57:04

tried to kill off as many as

57:06

you can without telling over healthy stuff

57:09

as well. It's more along the lines

57:11

are thinking about it in terms of

57:13

sell reprogramming with were doing for other

57:15

purposes but reprogramming cancer cells to bring

57:18

them back on track to bring them

57:20

back into a healthy state. or perhaps

57:22

programming them in a way where they

57:24

get stuck in a dead end where

57:27

they. Tom proliferate aware that kind

57:29

of sitting ducks for chemotherapy.

57:31

so he does it. Hopefully

57:33

this way of thinking about

57:35

cancer as a sort of

57:37

dynamical systems sort of take

57:39

just that. This that might

57:41

lead to other approaches to

57:43

attacking. While. And you know

57:46

one thing that dissemination them anything

57:48

to things thirst. Do you think

57:50

that tumors may be used to

57:52

sort of these quasi agents to

57:54

understand the composition algae of agency?

57:56

Because if they're sort of organs

57:58

of a sort. They're not quite

58:00

and the some composite of things that

58:02

have it existed before but they do

58:04

have agency and away have a mic.

58:07

Maybe tumors could be a useful model

58:09

of understand the agency. Well I

58:11

think he hasn't Really interesting I thinking

58:13

that the I certainly think that. Thinking

58:16

about to move from an agent for

58:18

point of view makes a lot of

58:20

sense because either them we need to

58:22

ask what manner of agents all about

58:24

what all that goals and as I

58:26

say you know that goes now seem

58:28

no longer to base well I'm just

58:30

gonna go proliferate as much as possible.

58:33

It's much more that they have club

58:35

active again so goals you know to

58:37

develop his ways it as meat silly

58:39

supporting within a tumor and that make

58:41

use of some of the agency that

58:43

healthy cells have club as also sort

58:45

of motivated. To think about that because I

58:47

know you read a lot about Mike Levin's work

58:49

with frog embryos my son amazing work with that

58:52

on the shelves many times that one of the

58:54

things that you emphasize or his you know bots.

58:56

So I wonder as you talk with Mike about

58:58

sort of. Combinations of frog

59:00

embryos cells to produce a variety

59:03

is seeding tumors and sort of

59:05

understanding their behavior. And a

59:07

searched understand cancer. Is it something that he's progressing?

59:10

It absolutely is. I've I've talked to a lot

59:12

to Mike over the years. You know for this

59:14

book and for other things in front of. When

59:16

I was in Boston when I was at Harvard

59:19

I visited Mike in the lab and that was

59:21

when I first. Woke. Up

59:23

to just on a new Every time I

59:25

speak to my A seems like he has

59:27

had new ideas have an answer to your

59:29

best and amongst those he's absolutely now and

59:32

as you know it he's gone public about

59:34

this already so I can say he's it

59:36

versus of of for me to start up

59:38

companies to make use of the word that

59:40

he's done on the scene about systems to

59:42

to find applications for them and it Of

59:44

by Medicine is absolutely going to be one

59:47

that they're going to be looking and it's

59:49

very early days whether it's going to pan

59:51

out or not I don't think. My nose

59:53

and alone anyone else. but you know,

59:55

Eight absolutely seems to be a sensible

59:57

way to to proceed. Yes, oh his.

1:00:00

Work on cedar box. It was another sort

1:00:02

of. I guess is

1:00:04

a you know trigger for getting me

1:00:06

to really think about what the broader

1:00:08

concepts of this book all because one

1:00:10

of that things that is the seem

1:00:13

to. Jump. Have from

1:00:15

the idea of thinking about cells

1:00:17

as these complex systems that have

1:00:20

it of a landscape of different

1:00:22

possibilities. Once you start thinking about

1:00:24

that, it seems I think pretty

1:00:27

inevitable that it's unlikely that evolution

1:00:29

has explored all the possible states

1:00:31

that ourselves half. I think it's

1:00:34

if it's very unlikely the road.

1:00:36

So what else is out there?

1:00:38

What? What This tissue types might?

1:00:41

cells be able to form that.

1:00:43

We haven't seen because you know evolution

1:00:46

just hasn't got there, hasn't had a

1:00:48

need for them. It seems utterly incredible

1:00:50

to think that is what evolution has

1:00:53

found. His exhaustive of all the possibilities

1:00:55

ourselves could do any more than evolution

1:00:57

will have exhausted all the possible proteins

1:01:00

that exists. Still, you know the possible

1:01:02

gene sequences. so what else is out

1:01:04

there in this is a in ah

1:01:07

solidity, what might is doing all this

1:01:09

other states of in his case you

1:01:11

know. He started with from sales. Other

1:01:14

states at these cells can have that

1:01:16

can be liberated that we can find

1:01:18

our way to and he found his

1:01:21

way to these ones that he causes

1:01:23

About Switzer didn't have collections of cells

1:01:25

are they're absolutely homeless. that a forms.

1:01:28

They're not just individual cells doing that.

1:01:30

it it offends the things. That are

1:01:32

formed that seem to. Be collective agents

1:01:34

of some sort and that has

1:01:36

as far as we can say

1:01:38

they don't correspond to anything that

1:01:40

we find in nature. I made

1:01:42

we've seen. You know that there

1:01:44

are observations going way back beyond

1:01:46

Mike's work for structures of this

1:01:48

sort that that frog cells in

1:01:51

particular seem to be able to

1:01:53

form but by by looking at

1:01:55

those rather than seeing those as

1:01:57

get updates of tissue that have

1:01:59

just started. Them loose or whatever.

1:02:01

Looking at them as potential agent

1:02:03

and seeing what they do if

1:02:05

left to their own devices ear

1:02:07

the A revealed all this kind

1:02:09

of behavior that had. presumably.

1:02:12

Been overlooked before. How advanced? Absolutely

1:02:14

the kind of thing that Mike's

1:02:16

experiments in a got me thinking

1:02:18

about. And of course he was

1:02:20

have way before me. Insane. What

1:02:22

else can sounds month that know

1:02:24

haven't made? Oregon? And you

1:02:27

know that leads us into

1:02:29

whole area's soft tissue engineering

1:02:31

and is straight biotechnology for

1:02:33

multi cellular biotechnologies. One else

1:02:35

can we build with cells?

1:02:38

And I guess I should mention that why

1:02:41

we called him a genuine i prefer Sudden

1:02:43

as a general is that the Duchess conglomeration

1:02:45

to sell that sit in a dish. Me:

1:02:47

these are new entity isn't entity that never

1:02:49

existed in evolutionary past As the conglomerations they

1:02:51

are different frogs but these are different kinds

1:02:54

of cells are you put them in mazes

1:02:56

with resource gradients and they can use the

1:02:58

sillier. Had thera. Follow. These resource

1:03:00

gradients and in that's what makes it a gentle.

1:03:02

they're not dying. As long as you're giving the

1:03:04

resources they're behaving. You're doing. And. To

1:03:07

me, I think you know one of

1:03:09

the mind blowing take away his here's

1:03:11

the agency of Emerges Re nationally when

1:03:13

you put cells together and to agglomerations,

1:03:15

right? It doesn't take some magic evolutionary

1:03:17

want that operates over a long period

1:03:19

of time, but rather the samosas capacity

1:03:21

of cells to form higher level agents

1:03:23

just directly when they come into contact

1:03:25

with one another either gets kind of

1:03:27

amazing. It is because it's not at

1:03:29

all obvious that they should do that.

1:03:31

Perfect. You know, even if we admit

1:03:33

that individual cells are Asians. How

1:03:36

do they collectively? In

1:03:38

of decide on the some some sort

1:03:40

of group of activists your life. you

1:03:42

know I should say that there are

1:03:44

people who say of my work well

1:03:47

what we're saying in this behavior it's

1:03:49

not actually purposefully so. Goal directed is

1:03:51

not a really I didn't so it's

1:03:53

just you know the playing out of

1:03:55

the things that the cells to share

1:03:57

the waving about of silly i would

1:03:59

happen to create this sort of motion

1:04:01

that isn't emotions you know with any

1:04:04

sort of goal or purpose. so there

1:04:06

are you know that there are people

1:04:08

a sort of pushed back on that

1:04:10

idea but I think it seems to

1:04:12

me hard to understand some of the

1:04:14

things that might have seen Xena bullets

1:04:16

do unless we. Bring and

1:04:18

a gentle picture to it. Now

1:04:22

hundred traits. Well, we're getting pretty close

1:04:24

to the end of our time. That

1:04:26

of will be guy wanted to ask

1:04:28

you about some really interesting thing, but

1:04:30

you had just of the very end

1:04:32

of your buck. You had this sort

1:04:34

of extended box at the end of

1:04:36

the last chapter and in it you

1:04:38

start to explore some of the consequences

1:04:40

or even just a question of are

1:04:42

there are consequences for how we understand

1:04:44

evolution of agency And this is quite

1:04:46

interesting. Of course, in light of this

1:04:48

ongoing controversy over the past couple of

1:04:50

decades about. What should the scope of

1:04:52

modern evolutionary theory be? How much of an

1:04:54

overhaul does it need? How inclusive and it

1:04:57

be of new ideas? I guess I just

1:04:59

want to. But the question to you directly,

1:05:01

like after having written or spoken thought a

1:05:03

lot about agency, Do you think it changes

1:05:06

in any fundamental way? How we should understand

1:05:08

the evolutionary process? Yeah

1:05:10

oh I would say on that is

1:05:12

it might do have a nice I'd.this

1:05:14

question naughty for view earlier idea of

1:05:16

what does have a revolution? it's and

1:05:18

I do tuck it in the book.

1:05:20

It is to some extent as well

1:05:23

because as you say I leave notice

1:05:25

this box at the end. Other two

1:05:27

reasons for that one it is that

1:05:29

I think I know enough about evolutionary

1:05:31

theory to know how little I know

1:05:33

about it and to know how vast

1:05:35

my ignorance of it is and also

1:05:37

to know how suffer ladies so I

1:05:39

don't. Feel I am well informed

1:05:41

enough about evolutionary theory to be

1:05:44

confident as a meeting about that.

1:05:46

But the other reason perhaps a

1:05:48

better reason for me being circumspect

1:05:51

about that is I don't think

1:05:53

anyone knows well enough at the

1:05:55

moment what these new perspectives on

1:05:58

biology are going to imply. For

1:06:00

evolutionary theory, I think it's

1:06:02

absolutely conceivable that when we

1:06:04

start to think of organisms

1:06:06

as agents that have their

1:06:09

own purposes and goals, including

1:06:11

ones that enable them to

1:06:13

change themselves and to change

1:06:15

their i make up in

1:06:17

some ways. the question of

1:06:19

is that going to impact

1:06:21

standard near Darwinian evolutionary theory

1:06:23

that was predicated previously on

1:06:26

seeing Morgan is of justice.

1:06:28

If you like passenger vehicles,

1:06:30

For jeans, you know they're no longer

1:06:32

passive. They're actually it's top down control

1:06:34

agents. Is that going to change the

1:06:36

theories it seems at entirely reasonable in

1:06:39

fact and an unavoidable question to ask.

1:06:41

but I don't think we know the

1:06:43

answer to that at the moment and

1:06:45

sites in our you you mentioned that

1:06:47

there are some people who are gonna

1:06:49

push back on some. The thing to

1:06:52

this book says I absolutely anticipated that

1:06:54

and absorbed into see more of it.

1:06:56

but I think of myself as quite

1:06:58

conservative and these respects because. I'm totally

1:07:00

it's agnostic about whether we need

1:07:03

something like this new evolutionary, extended

1:07:05

evolutionary sense as as or whether

1:07:07

you know we just need to

1:07:09

tweak standard near darwinian theory. A

1:07:11

Whether in fact, a lot of

1:07:13

these things are already in there,

1:07:16

a Weather's Nice Construction already incorporates

1:07:18

his idea, as you know, a

1:07:20

gentle behavior from organisms. I'm totally

1:07:22

on the fence about that because

1:07:24

I don't think I understand the

1:07:26

issues well enough to decide, but

1:07:28

also has a. Anyone does I thank

1:07:31

you? Probably spend a dentist was about

1:07:33

this. Dennis is a fantastic book we

1:07:35

have. Yes, yep, yep. You know I

1:07:37

think he makes a great case for

1:07:39

why weeds really do need to revise

1:07:41

the lots of our ideas and evolutionary

1:07:43

theories. You know, it's a really interesting

1:07:46

case that as I say, I'm agnostic

1:07:48

about how much of that is needed

1:07:50

or how much is understood at the

1:07:52

moment. but these are. Definitely.

1:07:54

Questions that this new sort

1:07:56

of perspective on living things

1:07:59

as aging, That definitely questions

1:08:01

that that perspective raises. Yeah, okay, last question,

1:08:03

sort of. Last question the first. I appreciate.

1:08:05

You know, the sort of caution that that's

1:08:07

really refreshing to hear because for a long

1:08:10

time we did hear there's a need for

1:08:12

It's an extended Everly Shards synthesis and that

1:08:14

just lead to a lot of arguments. It

1:08:16

feels like people talking past each other so

1:08:19

that that take was a fresh in your

1:08:21

book. Very much can say that perspective. One

1:08:23

of the other things that it says is

1:08:26

that in a we should maybe look for

1:08:28

or provide better metaphors besides agency. I. Think

1:08:30

you're clearly behind agency is one of

1:08:32

those, but the have other said mind

1:08:34

or the have specific ways that you

1:08:37

think that agency can be a useful

1:08:39

metaphor. Yeah, well. the notion of metaphors

1:08:41

in biology is is also pretty central

1:08:44

to what I talk about in this

1:08:46

book because it became clear to me

1:08:48

it's first of all how much everything

1:08:50

we say depends on metaphor. Idol language

1:08:53

spends. A metaphor for the everything in

1:08:55

science depends on that. But I think

1:08:57

the life sciences are particularly reliant on

1:09:00

metaphor because. Life is such

1:09:02

a complex thing and so that's

1:09:04

essential. It's necessary. It's useful. But

1:09:06

he's also dangerous because these metaphors

1:09:09

become so strong. The blueprints. you

1:09:11

know for the genome. the selfish

1:09:13

gene. We introduce him for a

1:09:16

reason, but then they get still.

1:09:19

And they become what is often called dead

1:09:21

metaphors which means not the they're actually get

1:09:23

a not use. That means that we forget

1:09:25

the they're metaphors and we just months. This

1:09:28

is how the way things are and then

1:09:30

that's when they become really dangerous. And

1:09:32

there's no good way for aren't

1:09:34

rooted metaphors We know. How to deal

1:09:36

with series we tested against experiment. You

1:09:38

know if the ferry gives wrong prediction

1:09:40

that eventually they get jumped out So

1:09:42

we know about that. But metaphors. There's

1:09:44

no mechanism inside syrup rooting them. and

1:09:47

I think that that's a real problems.

1:09:49

So I really wanted to push back

1:09:51

on some of the metaphors we used

1:09:53

the machine matter for in you know,

1:09:55

it bows he to I really wanted

1:09:57

to say knows, they're very good arguments

1:09:59

I think. Showing now that that's

1:10:01

not a good way to think about

1:10:03

living things, nor is it good to

1:10:05

to bring in computer metaphors. too much

1:10:08

so. yeah, we need new metaphors and

1:10:10

I don't yet know what some of

1:10:12

that is. All but one thing that

1:10:14

did become I felt clear to me

1:10:16

in the course of this book is

1:10:19

that perhaps life needs to be. Living

1:10:21

systems need to be that own metaphor.

1:10:23

Biology needs to be the source of

1:10:25

it's a metaphor rather than during a

1:10:27

metaphor. For math technologies. we don't have

1:10:30

any technology. That works in the

1:10:32

way life does none and so we

1:10:34

need to get rid of those have

1:10:36

some is metaphors and for example yeah

1:10:38

I talked about this wasn't my idea

1:10:40

either that how. The combinatorial systems

1:10:43

that we see working

1:10:45

in gene regulation. Where I

1:10:47

you know talked about all these committees

1:10:49

of molecules working together in some fashion.

1:10:52

A great metaphor for that is the

1:10:54

way our own factory system works. Where

1:10:56

we have you know, justice kind of

1:10:58

few hundred sensory receptors. Or

1:11:00

we have millions and millions of

1:11:03

different into significant for those because.

1:11:05

I grew up combinatorial and so

1:11:07

there's you know, a metaphor where

1:11:09

we could use one living system

1:11:11

to refer to another. The whole

1:11:13

notion of living systems as cognitive

1:11:15

beings don't move agents, comforted systems

1:11:17

that is out in a sense

1:11:19

a metaphor that comes from cognition

1:11:21

Council. the way our brains worth

1:11:23

a maybe something more than that

1:11:25

but certainly again. I think it's

1:11:27

a a this say to a

1:11:29

set of more useful matter for

1:11:32

than a sort of machine bags

1:11:34

metaphor. So that's. As much as

1:11:36

I can offer this stage that actually

1:11:38

into get good metaphor for living systems

1:11:40

look for other living systems to draw

1:11:43

them from. That makes sense. Now.

1:11:46

Well. That's just a beautiful and of I got

1:11:48

the great place to stop so ball thanks so

1:11:50

much for the conversation has been a total delight.

1:11:52

We always ask our guess at the very end

1:11:54

as as anything else you'd like to say the

1:11:56

thing we didn't cover that is like to have

1:11:58

last word on. I think you've tried

1:12:01

have gone. It's got in my mind from

1:12:03

the start to the finish of my book

1:12:05

so I think I have happened. If you're

1:12:07

a very debris and civic during that we

1:12:09

want to the appendix sorry that into their

1:12:11

defending said there is nothing I feel at

1:12:14

a to add scientists so but both of

1:12:16

us been fantastic talking d. Thanks.

1:12:18

Phil Thanks a lot that you. Listening:

1:12:35

If you like what you hear, let. Us know

1:12:37

by X, Facebook, Instagram, or Six Often

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1:12:41

your purchase. An element of that, right

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1:12:47

Blame him and his website and money to

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get in. The opposite think it is Dana

1:12:51

Dela Cruz for her and they social media

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works in some areas person. Next

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to the College Public Health University of

1:12:59

South Florida. The National Science Foundation for

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Support music on the episode is from

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Huntington Bears and Here and Costello.

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