Episode Transcript
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2:00
Onto the him. To
2:09
do so deals with to general problems
2:11
that plague biologists really, biology specific versions
2:13
of problems that plague all of us.
2:15
As we interact and think about the
2:17
world, the first thing is that we
2:19
see what we expect to see and
2:22
not what's actually there. Maybe. To
2:24
see that seen as image of the young
2:26
and old woman both trapped in the optical
2:28
illusion that first appeared on an Eighteen Eighty
2:30
Eight German postcard. Most people see either one
2:32
or the other at first, but if you
2:34
look more intently, what you see flips back
2:36
and forth. The young and the old women
2:39
are both there, but we naturally see one
2:41
of the other more readily, and it takes
2:43
real mental effort to see the other form.
2:46
Why? The some people see the old form
2:48
first and others the young? The some evidence
2:50
that people are more likely to see the
2:52
form that corresponds to their own age and
2:54
the group of people with whom they socialize
2:56
most often. And. It's also possible
2:58
that people just filter information about their
3:01
worlds and different ways. Recall that two
3:03
thousand and fifteen viral sensation. They're basically
3:05
broke the internet. The famous blue and
3:07
black stripe dress? You mean white and
3:10
gold, right? Ah, Ok, was not go
3:12
there. rather. onto the second problem, which
3:14
is related to but distinct from the
3:16
first. It's what we might call a
3:18
naming problem which you may have heard
3:21
of in relation to of all things
3:23
Buddhism. Although. Buddhism doesn't outright
3:25
claim that naming things constraints are
3:27
view of the world. It doesn't
3:29
acknowledge that words and language more
3:31
generally shape our perceptions and can
3:33
lead to attachment, suffering, and misunderstanding.
3:35
For those more scientifically inclined, a
3:38
similar objection could be raised to
3:40
using metaphors and science. Think.
3:42
The tree. Of life, molecular machines,
3:44
scenes as blueprints, information superhighway,
3:46
and others. He's metaphors provide
3:48
a beautiful shorthand for conveying
3:50
concepts and prophecies, but conversely,
3:52
they can become mental handcuffs
3:54
if we take them to
3:56
literally. These problems loom large
3:58
and a conversation today. The science writer
4:01
Fill Ball, film written over twenty
4:03
five books and contributes regularly to
4:05
publications such as The Do Scientists,
4:07
The New York Times, The Guardian,
4:09
and The Financial Times. He was
4:11
also an editor at the journal
4:13
Nature for over twenty years, with
4:15
gave him an unusually broad look
4:17
at breaking discoveries in Chemistry, physics,
4:19
and biology. We focus our conversation
4:21
on fills latest book called how
4:23
Life Works, in which he describes
4:25
recent advances across all levels of
4:28
biological organization. As you might imagine,
4:30
The book covers highly diverse topics that
4:32
there's a subtle kind of met a
4:34
theme that runs through all of the
4:36
chapters. And that is we consistently don't
4:38
really know what we think we do.
4:40
Both. Because we're usually not looking at
4:43
the process or problem for the right
4:45
angle, and even if we do, we
4:47
tend to construct metaphors that harden rapidly
4:50
into dogma. Disheartening can prevent us from
4:52
seeing readily beyond the metaphors walls. That
4:55
was a metaphor for that metaphors. I
4:58
know. But onward take for example, fills
5:00
chapter on how proteins work. We all
5:02
know how they work, right? Well in
5:05
the prevailing metaphors, the day proteins are
5:07
tiny molecular machines. We say that their
5:09
chemistries and shapes or evolved to carry
5:11
out some process, often by a fitting
5:14
together like a lock and key with
5:16
a handful of other molecules. But.
5:18
Still argues that's all wrong. The
5:20
past ten years or so have
5:22
revealed that many proteins do not
5:24
has six well defined structures, But
5:26
the rather expansive, floppy and promiscuous
5:28
and he interacted large and small
5:30
ways with hundreds, even thousands of
5:32
other molecules is fundamentally changes How
5:34
we should think about the functions
5:36
of proteins and also about the
5:38
structures of intercellular networks and the
5:40
standing Verizon available to natural selection.
5:43
For. Sure not what you get out
5:45
of most standard textbook in biology and
5:47
fill is not nearly done with big
5:50
questions including the biggest one that we
5:52
can ask which is what is life
5:54
here. Film talks about where causation comes
5:57
from in living systems most of and
5:59
therefore Scottish. It's a highly reductionist
6:01
or bottom up view of causation
6:03
feel argues. Instead that some causation.
6:05
Comes from higher levels of organization
6:07
with causality flowing downward. The basic.
6:10
Gist is it is living systems get
6:12
more complex. The information inherent. To the
6:14
new structure least the whole system to
6:16
be more than the sum of it's
6:19
parts. In other words, here we get
6:21
into yet another extended but interesting discussion
6:23
about agency, purpose and goals, and biology.
6:26
And. Finally, a significant chunk of our talk. Focuses
6:28
on what our new understanding of biology
6:30
means for medicine, how we could manipulate
6:32
complex systems to keep people healthy, and
6:34
whether they are better ways to treat
6:37
cancer. And as we do been reading
6:39
fills book, you may feel the vertigo
6:41
that comes with your point of view
6:43
suddenly flipping into an expansive new configuration.
6:46
You are such a nerd. sometimes I'm
6:48
not even sure what to say. I'm
6:50
Window Star and I'm a little embarrassed.
6:52
Okay, I'm Art Woods and I Marty
6:55
Martin and you're listening to Big Biology.
7:12
Biology Harden I read your new book How
7:14
Life Works and we both absolutely loved it
7:17
as a shared it with a lot of
7:19
friends including what a biologist who probably be
7:21
surprised as I was about how much we've
7:23
learned about how life works at different levels
7:25
of organization. Things are very different since we
7:28
learn them as students with wanna spend most
7:30
of our time on discoveries in the book
7:32
the we do wanna hear little bit more
7:34
about your method and and maybe a little
7:36
bit about why some people have been upset
7:39
and Juri seen it is controversial in a
7:41
way that Melissa really. Slowly and let's talk
7:43
about that method. Sync your a chemist and a
7:45
physicist right? What was it a made? Was it
7:47
your time at Nature is an editor's in and
7:49
you did that for quite awhile? Was it those
7:52
experiences or what was? It is sort of first
7:54
planet that see the gets you thinking about these
7:56
things. With. Us right on. So my
7:58
first degree was in chemistry and then. Kind
8:00
of switch fields and went into condense
8:02
metaphysics. So a you could say my
8:04
qualifications for writing about biology a close
8:07
to zero. As a chemist, you come
8:09
across some of these ideas you know
8:11
you come across the ideas about for
8:13
example, the way proteins were. You know
8:16
what these molecules looked like, the way
8:18
they interact. but very much for the
8:20
canvas point of view. So yes, it
8:22
was the site that I spent years
8:24
as an editor at Nature. This the
8:27
science journal which exposes in those days
8:29
is is. Back in the late nineteen
8:31
eighties, early nineteen nineties, Nature wasn't this big
8:33
publishing empire that it is now. it was
8:35
just a journal. and it was a journal
8:38
with very small south. So it meant that
8:40
he spoke to everyone handling every subject you
8:42
came across. Everything. That was why it wasn't
8:44
a fantastic. Such an exciting place to be
8:47
on. It meant though there were a lot
8:49
of very steep learning curve said I had
8:51
to go off the in order to get
8:53
some kind of handle on a lot of
8:56
this stuff because as an editor I was
8:58
handling papers in biochemistry. and by. Physics as
9:00
well as in straight physics, material science
9:02
and so on. so I had to
9:04
learn a lot there. But also I
9:07
was good daily hearing about the latest
9:09
things that were happening. A bar with
9:11
it's trying to make some sense of
9:13
them are being able to talk to
9:15
colleagues. Do it, At least get some
9:17
handle on that. That was what really
9:19
not just stay something of an education
9:21
in biology but also made me aware
9:23
of some of the cutting edge issues
9:26
in biology gadgets. A link in the
9:28
bookie write something about the the Went
9:30
Jeans. With those a particular inspiration and
9:32
if the answer is yes but to
9:34
talk about what those scenes and what
9:37
they're involved and they seem to me
9:39
to be a very good example of
9:41
the way of the way that we
9:43
understand. James has changed over the past
9:46
several decades said the wind genes that
9:48
their genes that are involved. Really. I
9:50
think all we can say about them
9:52
is their genes that have roles in
9:55
our development in our development from an
9:57
embryo to are you know to a
9:59
baby. We can be no
10:01
more specific about it than that
10:03
because they crop up in all
10:05
sorts of places and if you
10:07
look into the name it's a
10:09
kind of portmanteau may Bavaria things
10:11
including they began as genes of
10:13
are identified in that prove rise
10:15
in for sophal us were a
10:17
mutation of the wind Jane created
10:19
flies the has no wings so
10:21
the W N as for wingless
10:23
and in a so the idea
10:25
was that the natural assumption at
10:27
that point would have been. Were
10:30
maybe these genes seasons fly genes that
10:32
has something to do with making wings
10:34
and innocence? They do clearly.this absolutely not
10:37
their function because we have dreams like
10:39
this as well and you know love
10:41
be. Hope we don't have wings so
10:43
they do something else as well. In
10:46
fact it turned out our version of
10:48
the genes were discovered in a completely
10:50
different context in some other developmental process
10:52
and they were given another name. And
10:55
then people realized hang on this gene
10:57
seems to actually be the same as
10:59
or and the human equivalent of what's
11:02
in fruit flies. So what's really going
11:04
on here? what do these things really
11:06
doing and then they crop up Indiana
11:08
Lots of other different developmental process is
11:11
because they are example in there are
11:13
other genes like this. Sonic Hedgehog is
11:15
another was my favorite that has absolutely
11:17
I have it in okay with that
11:20
name for and you know there there
11:22
again is another interesting kind of etymology
11:24
of how he got that name. but
11:26
you know their these genes that just
11:29
seem to have many. Different roles
11:31
in development processes and in a
11:33
way that's not the they do
11:35
anything. They're almost like general purpose
11:37
genes that development use as if
11:40
you like that ourselves use in
11:42
order to make different sorts of
11:44
body structures. A So it's a
11:47
reflection of the fact that there
11:49
are lots of things that we
11:51
have that you can't assign specific
11:53
tasks to. You can't draw a
11:56
line granny from the teen in
11:58
our genome to to. Treat
12:00
some developmental seen a to meet you
12:02
know, somebody safe or whatever. The that's
12:05
not the way it works so there
12:07
isn't a sort of planned rarely. That
12:09
does, from the genome to the
12:12
phenotype. Something else is going on and
12:14
these genes the way I talk about it
12:16
in the book is that is better to
12:18
see a lot of them as just resources
12:20
of a very general thoughts that the cells
12:23
can draw upon in order to do the
12:25
things they do to make us. And
12:27
our beautiful i want to echo at
12:30
Marty said about Justice loving a book
12:32
yeah I had a sunny feeling reading
12:34
it as you know in each chapter
12:36
thinking okay I know if chapters about
12:38
and then suddenly feeling like wow the
12:40
something like really new here that I
12:42
didn't expect. like the chapter on protein
12:44
functions are parties come about, unfold and
12:47
and do the jobs they do. And
12:49
I was thinking about this in relation
12:51
also to just the basic teaching a
12:53
biology which I feel unsatisfied about. I've
12:55
been quite unsatisfied with my own teaching.
12:57
A Biology and I think many, many university
12:59
courses restructured in a way where it's just
13:02
kind of a slog through a bunch of
13:04
facts that. That. We know in that
13:06
have been known for a long time and I
13:08
thought reading your book that they would be a
13:10
really inspiring thing for students to have a book
13:13
like that and to have the course follow the
13:15
progression of that book because it's you know it.
13:17
It just pushes you so rapidly out onto the
13:19
edge of where are the interesting questions and what
13:22
are we in a won't let me think about
13:24
next So I guess my question is did you
13:26
have that in mind when you're writing this and
13:28
you envision it being used for teaching and any.
13:32
I. Would be delighted if it was used
13:34
for teaching. And you know one of the
13:36
things that are obviously the I wanted to
13:38
do was to try to bring up to
13:40
date the stories that we tell about the
13:42
different levels of what's going on in biology
13:45
from Dna to our innate broke into someone's
13:47
house Rt and I'm so pleased that you
13:49
say that that was your experience because it
13:51
was very deliberate that for each chapter yet
13:53
it works in a way that could sound
13:56
very dry and tix with a but i
13:58
hope doesn't turn out that way. It
14:00
works through the different levels of biology
14:02
from starting with jeans with Dna, getting
14:04
to iron, A, going to proteins, going
14:06
to in a network, and cells and
14:08
so on. But at what I wanted
14:10
to try to do with this show
14:12
house each of those levels. A.
14:15
Any to those levels, Something significant has
14:17
changed over the past ten twenty years
14:19
or so in the way we think
14:21
about what's getting on. so you know
14:24
the the standards. Think that sunni the
14:26
school kids at automated and agree to
14:28
talk is that it of we have
14:31
these genes. He include proteins, the proteins
14:33
of the enzymes. that kind of some
14:35
have put us together on this is
14:38
how it works and that story isn't
14:40
wrong, but it's far more complex than
14:42
that and it's not so linear as.
14:44
That and also I mean as he
14:47
either you mentioned proteins This was a
14:49
real revelation to me on this was
14:51
something that was brought home during that
14:53
time I spent in twenty nineteen at
14:55
Harvard Medical School that I had as
14:57
a chemist. I had this idea that
14:59
just very neat and intuitive that we
15:02
know these cells are full of molecules
15:04
in other thousands of different proteins in
15:06
every cell. How on earth do they
15:08
ever find the right targets and do
15:10
the right thing without getting distracted by
15:12
all this other stuff? And the idea
15:14
is. That there's this molecular recognition
15:16
whereby eat protein as a particular site.
15:19
That means it sits the target molecule,
15:21
that it's meant to fit and ignores
15:23
all the others because they're the wrong.
15:25
Say yes, that that's the iconic vision
15:28
that we all have, right? Absolutely yeah
15:30
of the of that to in a
15:32
recent wrong there at protein to work
15:34
that way. Lots of enzymes do work
15:37
that way, but lots of them don't
15:39
and all hub in our really had
15:41
no conception of this until a few
15:44
years ago and. It was a
15:46
revelation that sleep there are plenty
15:48
of proteins particularly in ourselves or
15:50
in this House of Lords. Creatures
15:52
like our Sarah many more proteins
15:54
of they sought in law screeches
15:56
than in smaller ones and certainly
15:58
than in bacteria that. Don't
16:02
have a nice fluffy they won't
16:04
the break it is to intrinsically
16:06
disordered owned a country based upon
16:08
this picture because it means because
16:10
her coffee we're currently shutters indiscriminately
16:12
sticking to thing the fair promiscuous
16:14
I've added for so they were
16:16
by and him up for different
16:18
things have happened after hat work
16:20
at your hobbies. Proteins that you
16:22
know that not selective in this
16:24
way. And not only that it's
16:26
not a so this is just
16:28
something that by what he has
16:30
been forced to do because it
16:32
can't make proteins in a specific
16:34
and often structured enough we know
16:36
that he can because twenty all
16:38
I batted. In fact most of
16:40
the proteins he bacteria on like
16:42
that. So during the course of
16:44
evolution as organisms got more complex
16:46
it seems that the proteins many
16:48
of the protein for got less
16:51
structured and more promiscuous. Why is
16:53
that? How does that work when
16:55
they don't dismiss more complex and
16:57
that's one of those send to
16:59
I think one. Of the central
17:01
themes throughout the book because it
17:03
points to a different kind of
17:05
set of operational principles at the
17:08
molecular level that involve this promiscuity
17:10
of molecular interactions and what tends
17:12
to happen is rather than isn't
17:15
a good for logic of this.
17:17
Speaking to that. We have
17:19
groups of things that all kind of
17:21
speak. To each other in some way
17:24
and they get together. And these groups
17:26
in various ways. right? Brain is much
17:28
more smeared out. Logic? Yeah, absolutely. As
17:30
so I talk about it is kind
17:32
of committees of molecules and you know
17:35
they're all sorts of process is crucial.
17:37
Processes in ourselves particularly have genes gets
17:39
switched on and off that rely on
17:41
these committees where the molecules. Are all
17:43
kind of speaking to each other in
17:45
fairly indiscriminate. Ways of more or less
17:48
discriminate and somehow out of that
17:50
process just as out as often
17:52
to the committees that we make.
17:54
A decision arises as a decision
17:56
right. Turn this gene off, Turn
17:58
it on. Do that. Do that,
18:00
but it's not anything that you
18:03
can attribute to a nice clean
18:05
digital. Logic of one molecule speaking
18:07
to another. Yeah. There are
18:09
a monitor sorry to hear about in
18:11
of the title of your blood which
18:14
I met proteins and I could infer
18:16
how that works. but your book is
18:18
beyond what one might initially assumed to
18:20
come from a book called how Life
18:23
Works as you just represented the novel
18:25
ways that with come to understand protein
18:27
function you alluded briefly to the novel
18:29
ways that genes operate relative to the
18:31
classic ways of the ways of this
18:34
may Art teachers them for talks and
18:36
is biology classes. But when you
18:38
when you titled the book How Life Works,
18:40
it's not what you meant something. Broader? maybe?
18:42
Let's start with your definition of life
18:45
because life also has the evolutionary dimensions
18:47
mingle and one other things as distinguishes
18:49
about life evolves. So how do you
18:52
define life? You quoted francoise zip code
18:54
saying that living organisms of the site
18:56
of a triple flow matter, energy and
18:59
information that are abstract things that you
19:01
return to them over and over again.
19:04
When you're with height of the book this how life worth. How
19:06
did it sort of include evolution and had a
19:08
the goal is sort of comes together to tell
19:10
it the way we think about. like generally. Yeah.
19:13
We're sisters. This is the biggest active ago question I
19:15
know that's a big was I'm I'm A, I'm in
19:18
her. First of all I have to say. Giving.
19:20
The book this title with an act
19:22
of incredible hubris and I hope it's
19:24
gonna be say the Friday's hugging see
19:26
because you know what are Vegas to
19:28
pray But you're gonna say in the
19:30
book this is how wife was, sit
19:32
back and alone are. Actually I hope
19:34
it becomes clear that my aim is
19:37
is to say we don't understand how
19:39
life works. You know there's so much
19:41
we don't understand about it but I
19:43
think we can safely say now but
19:45
it doesn't work the way we thought
19:47
it did or least our life because
19:49
a lot of what I'm talking. About
19:51
as I sort of, you know dried
19:53
already a lot of what I'm talking
19:55
about. a price to us as modes,
19:57
complex organisms so you know and one
19:59
of the key Id in the book
20:01
and this again was a revelation to
20:03
me is that the way we work.
20:06
Doesn't. Seem too often
20:08
have the same basic principles as
20:10
the way that here world often
20:12
we study bacteria were understandably because
20:14
and much simpler that single celled
20:17
organisms you know you consider. See
20:19
him to the much more plainly
20:21
said we've study then as a
20:23
first step and they often assumed
20:26
and you ventured Francois Sack of
20:28
you know that Jack of Amano
20:30
were the ones who first talked
20:32
about gene regulation in the Nineteen
20:35
sixties and the assumption. With lung
20:37
made that the way they explained
20:39
it is probably get as the
20:41
similar in humans as it turns
20:43
out that it's not. that I
20:45
see the molecular principles of gene
20:47
regulation are largely different enough so
20:49
that was one of the key
20:51
messages that actually we can't generalize
20:53
often for bacteria to us there
20:55
are some basic things had a
20:57
similar of course we all have
20:59
Dna, we'll have our and I
21:01
will have proteins it as France
21:03
is correct. Central Dogma is kind
21:05
of basically. Still the same all
21:08
along, but the real. Principles.
21:11
By which our cells work on
21:13
the same as those and bacteria
21:15
so that was one of the
21:17
key messages. How life works is
21:20
not a single question and how
21:22
our life works is not the
21:24
same desire bacterial life was inmates
21:26
t respect.e of the question as
21:28
well. What is life Anyway,
21:31
in a what are we talking about
21:33
here? That's actually something that I sidestepped
21:35
in the books. I say I up
21:37
front that people like in a from
21:39
Jbs How Dying To Earn Shrouding Ass
21:42
and as a lovely recent book by
21:44
pool nurse as well it's all a
21:46
Cold War his life and none of
21:48
them on cigarettes A thousand is the
21:50
wisest fake as he begins at the
21:53
very first sentence in that book or
21:55
our essay is I'm not going to
21:57
answer this question and you know that's
21:59
right, Because there is no consensus about
22:01
that, there's a lovely but By tells
22:04
him a good life said was explore
22:06
that question and can't rightly points out
22:08
in a we don't know net net
22:10
there is no agreement. basic rights that
22:12
so the approach zeit of these well
22:14
I don't have to answer that question
22:16
in a sense because I'm talking about
22:19
we know the were alive, we're form
22:21
of lies had a we work is
22:23
rarely what I'm talking about but inevitably
22:25
and trying to answer that question. If.
22:28
I do have to come back to the
22:30
question of what what is it that is
22:32
going on it which he really is about.
22:35
You know, what is it is going on
22:37
in life. So you do have to take
22:39
a step back because all of these complexities
22:41
are set. You know there's some from brakes.
22:44
It's so extraordinary. That you have as
22:46
many different levels from seems to proteins
22:48
to that was the cells to tissues.
22:51
That somehow, even though
22:53
they have different operational
22:55
principles themselves, somehow they're
22:57
all operating together. In.
22:59
Ways that support each other to build
23:02
something. So what's keeping the show on
23:04
the rise? What is it over all
23:06
that life is doing and that led
23:09
to some questions that really go. Yeah,
23:11
we certainly go beyond the molecular specifics
23:13
and you get into questions of what
23:15
is it that life is if you
23:18
like trying to do and we get
23:20
to this question of agency. So I
23:22
have a chapter towards the end of
23:25
the book on agency and really, I
23:27
think the key point I wanted. To
23:29
make there is it's a real question
23:32
is one that biology has.it's one that
23:34
ballsy still seems to be uncomfortable about
23:36
because you have to start talking about
23:38
things like function and even purpose which
23:40
I eat out to do Words I
23:43
have often be takes to village of
23:45
Biology but you really have to think
23:47
about those if we going to grasp
23:49
agency. and I think what Biles he
23:52
needs is a proper theory of agency
23:54
and there's nothing of that sort of
23:56
the my mom. Mass for
23:58
beautiful and me couldn't agree. I
24:01
want to just continue on this feet. So
24:03
you know if we think about agency and
24:05
causation at different levels, what I hear you
24:07
saying is that as you move from bacteria
24:10
to more complex you coyotes and multicellular organisms
24:12
you get a shift in the the sort
24:14
of Los I have causation and the Los
24:16
I have agency. So for example antibacterial level
24:19
you might think of the lack opera on
24:21
and Nikolai as a sort of a gentle
24:23
circuit right said in a road very real
24:26
sense is making decisions about what sorts of
24:28
sugars are available and what sorts. Of
24:30
ways it should retool it's biochemical machinery
24:32
to use that sort of cigarettes a
24:34
very generic kind of based. Locus
24:37
of Causation. And I think what you're saying
24:39
is that as you get more complex animals
24:41
like us, those Los I a current other
24:43
levels. so maybe let's just be more specific
24:46
about that. What levels to be a crowd
24:48
and what prophecies are you talking about? Yeah.
24:51
Whoop. This was another kind of
24:53
penny dropping when I was in
24:55
a struggling to figure out what
24:57
the structure, what the general theme
24:59
of this book was. The issue
25:01
of causation, I think is an
25:04
absolutely crucial one. And there's this
25:06
idea that has been talked about
25:08
for a long time, but often
25:10
in very vague ways. the notion
25:12
of emergence and you know, emergent
25:14
systems. and it's often illustrated with
25:16
reference to things like flocks of
25:18
starlings or even road traffic. Where
25:20
you get structures. And patterns that
25:22
can't be deduced by looking at the
25:25
individual components of the system. You can
25:27
only see them as they emerge at
25:29
some higher levels. And this is something
25:31
that I say it's familiar in physics
25:34
is being familiar for a long time.
25:36
In a sense, what we call phase
25:38
transitions are examples of emergence. That's there
25:41
is nothing in a water molecule that
25:43
will tell you the water has three
25:45
different phases gas, liquid and solid and
25:47
that their as jobs switches between them.
25:50
These are cooperatives things. That happen between
25:52
many water molecules. Phase transitions are
25:54
emergence and ominous. So it's a
25:56
real thing that happens is certainly
25:58
in nature. We see it
26:01
also in organic nature in life, but
26:03
it's very hard to sort of pin
26:05
down. But one of the aspects of
26:08
that notion of emergence is what some
26:10
people to talk about as causal emergence.
26:12
And here again it's become possible to
26:15
quantify this to get series to understand
26:17
this, that there are some complex systems
26:19
and we seem to be one of
26:22
them and things like the brain or
26:24
also one of them were. It turns
26:26
out that that never ways you can
26:29
measure the amount. Of causation that's happening
26:31
in a complex system at different levels,
26:33
at different levels of magnification if you
26:35
like. And it turns out that there
26:38
are some systems where the causes of
26:40
the overall behavior of the system are
26:42
located much more in the higher levels
26:45
of the system, the bigger scale things,
26:47
and in the smaller scale things as
26:49
this is the idea of course, on.
26:53
Of this seems to be remade it's
26:55
it's be measured in living things at
26:57
it seems that they're absolutely is a
26:59
degree of causal emergence. In living
27:01
things At once again, there's
27:03
a difference between simple living
27:06
things are bacteria and complex
27:08
organisms. Air is more as
27:10
he would probably intuitively expect,
27:12
but you can quantify. there
27:14
is more quarterly migrants and
27:16
complex creatures White House which
27:18
means the causes of our
27:20
behavior are located at higher
27:22
levels organization than for example,
27:24
the genome. So. There are
27:26
many things that that happened where
27:28
you cannot say can't point to
27:30
a gene or even two or
27:32
three jeans and say these of
27:34
the causes of this is what
27:37
we've known as certainly in Juno
27:39
makes for a long time that
27:41
it's that. The notion for example
27:43
that if you try to identify
27:45
which genes or was gene variants
27:47
are correlated with particular trait like
27:49
height or like intelligence or like
27:51
obesity for example if we're thinking
27:53
about either did he did you
27:55
find out. That as most of the
27:57
genome, right? Absolutely Yes. So a hit
27:59
us all. Regina, what does that
28:01
may? Well, you know. one way of
28:03
thinking about it is well people say
28:05
was that all the genes are somehow
28:07
causes but that doesn't really tell you
28:09
anything that doesn't sort of mean anything.
28:12
I think all that's really telling us
28:14
is that the truth causes for those
28:16
kinds of traits. Happen at
28:18
a higher level and what you
28:20
can see and that the genes
28:22
are still affecting them, influencing them
28:24
in some way but always seeing
28:26
in as genomic carnations all the
28:28
echoes is rarely of causation happening
28:30
at higher levels. Miss any means
28:32
that if you want to make
28:34
interventions as we want to in
28:37
medicine that there were plenty of
28:39
friends that have some fanatic component
28:41
thanks to spend every time we
28:43
have or something that compartment but
28:45
this cannot be fundamentally cannot be
28:47
addressed or intervened. In the genetic
28:49
level, not just because they're too many
28:51
genes involved at because that's not where
28:53
the causation lies in a we see
28:56
this a lot for example with Cozad
28:58
that actually you know the problematic cases
29:00
of cove it what seem to be
29:03
happening to cause problems wasn't something genetic
29:05
even though some people seem to have
29:07
more of a genetic propensity to have
29:10
a bad rash. And to go with
29:12
the my case the level of the
29:14
immune system. and in fact you know
29:17
Tanzania and this is something that has
29:19
been had been a recognized for a
29:21
long time and biomedicine. The immune system
29:23
is such a locus of causation for
29:26
so much that happens to us, even
29:28
things it doesn't seem obviously connected to
29:30
information and immune response, it's a massive
29:33
locus of causation. and so if we
29:35
want to intervene in those sorts of
29:37
conditions that we shouldn't be looking to
29:40
find a genetic target or a protein
29:42
target for a drug to hit, we
29:44
got to find a way of intervening
29:47
that is going. To alter the way
29:49
the immune system does stuff. so we
29:51
need to intervene at a higher level
29:53
of causation. So that's what I mean
29:56
by cause, will emergence and also why
29:58
I think it's an important. The
30:00
biology and buy medicine. And
30:11
it will circle back to her five medical
30:14
implications of the book in a bit. Being
30:16
a bit of an immunologist and especially intrigued
30:18
to talk about these kinds of things the
30:20
before we leave it enters Touch on Agency
30:23
is are brought up. What do you think
30:25
about the selfish Gene concept as I want?
30:27
I want to talk about your book in
30:29
the context of evolutionary theory or. You.
30:32
Know modern understanding of how life works,
30:34
what it means, for how we think
30:36
evolutionarily? How does the self esteem concept?
30:40
Where I'd always have this struggle with
30:42
the notion of selfish genes because you
30:44
know it's clear I think to to
30:46
every who hunted by him as he
30:48
that our genes have to operate cooperatively
30:50
in order to be a part are
30:52
not going to say to build because
30:55
then static us right way to look
30:57
at it. But to be a part
30:59
of you know an organism that enables
31:01
the evolution to happen at all. So
31:03
to be viable they have to cooperate.
31:05
They have to do all their respective
31:07
jobs at the right place and time.
31:10
You know in relation to one another. And
31:12
in fact the whole selfish gene idea isn't
31:14
about what the genes the during, it's about
31:17
what different variants of particular James the doing
31:19
important different alliums A doing so. There is
31:21
a meaningful sense if you think about population
31:23
by with you there is a meaningful sense
31:26
in which we can think of different
31:28
alley, a list of a given g as
31:30
being in competition with one another you know.
31:32
and if you like being selfish because you
31:35
know it is a bit of a zero
31:37
sum game that you have one of
31:39
those alley. Else is fucking if
31:41
he likes it. To put it
31:43
that's remotely is trying to outdo
31:45
the others so I I totally
31:47
understand. You know why that picture
31:50
make sense. In terms of evolutionary
31:52
population biology, it doesn't make sense.
31:54
It is incoherent from the point
31:56
of view of thinking about genetics
31:58
from a different. Mental Defective and
32:01
developmental biologists have felt this way forever.
32:03
Rarely you know bank. Certainly banks don't
32:05
know what into this has been us
32:07
a problem that they have. So one
32:09
thing that I talked about in the
32:12
book is that there is this at
32:14
least as conceptual difference between the notion
32:16
of a gene in evolutionary biology and
32:18
in developmental biology and is always been
32:20
hard to reconciled as to an insight.
32:23
Perhaps I can't be reconciled because we're
32:25
talking about genes in different contexts that
32:27
way. but what I wanted to try
32:29
to do here I kind of am
32:31
sensing at it would have been easy
32:34
in a way to have simply attacked
32:36
the notion of a selfish gene. from
32:38
this point of view of enough you
32:40
think about it about mentally it makes
32:43
has since But I i thought well
32:45
it really is a useful idea to
32:47
evolutionary in a to desist of use
32:49
it all the time. So what is
32:51
it really expressing. And a it
32:53
seems to me that it's. Not a
32:56
metaphor for what genes are of
32:58
what foods do, It's a metaphor
33:00
for the models they used in
33:03
evolutionary biology to understand that particular
33:05
aspect. And those models don't? I
33:08
mean, you know, I've spoken to
33:10
Evolution Policies who sets a says
33:12
models don't really recognize organisms as
33:15
such at all, and either Richard
33:17
Dawkins talks about the organism is
33:19
simply a vehicle for the genes.
33:22
That notion, it seems nice, almost
33:24
antithetical to. Eat a one star
33:27
with is trying to do to
33:29
understand organisms in there and right
33:31
into some respect. Organism said, there
33:34
are right, but it is a
33:36
viable enough picture if you're thinking
33:38
about populations of different alley ales
33:41
and how those in a chain
33:43
three to three times south. Really
33:45
the selfish gene notion? It's a
33:48
metaphor for the models that evolutionary
33:50
genetics uses to understand how populations
33:52
of different alley or change over
33:55
time. So that's fine, but it's
33:57
really important I thanks to recognize
33:59
that the. What It's doing.
34:01
It's not a metaphor for what
34:03
seems all of a what Genes
34:05
do. It's a metaphor for that
34:07
particular model of evolutionary biology. And.
34:10
I never thought of it that way. Others
34:12
Really interesting. Another word that we've already said
34:14
multiple times here is agency and I think
34:16
it's worth maybe being also a little more
34:19
explicit about what you mean by this word
34:21
agency, which we hear increasingly in the scientific
34:23
literature. It feels like sort of an interesting
34:25
moment for this as an idea, but to
34:27
you, what is That was an important. Well.
34:30
I, I think I'd give a
34:32
definition of agency as opposed to
34:34
life. I'd say something along the
34:36
lines that an agent is an
34:38
entity that is able to act
34:40
on itself and on it environment
34:42
in order to achieve. Self.
34:45
Directed of self determined guns. So
34:47
an agent is some entity that
34:49
has goals for a start. and
34:51
there goes that. I mean, there
34:53
are various ways that they could
34:56
be set. You know. I I
34:58
think goals for organisms are set
35:00
by evolution is so either evolution
35:02
is a process that produces goal
35:04
oriented things. Evolution itself. the process
35:06
of evolution, as far as we
35:08
know, has no goal. There's no
35:10
obvious reason why we should think
35:13
of evolution as having us I
35:15
target. Or at direction or anything.
35:17
Some people have argued that either
35:19
they're always a week. That might
35:21
be the case. I that's an
35:23
interesting debates.we don't particularly need to
35:26
get into that to understand agents.
35:28
it's simply that evolution create goal
35:30
oriented entities. And it's it's It's
35:32
amazing To uncontroversial it we have
35:34
no problem with the fact that
35:36
we are goal oriented beings and
35:39
the goals that we have a
35:41
often We kind of here that
35:43
if we admit that living. Things
35:45
have goals, their survival and reproduction. and
35:47
you know that I often. that's the
35:50
case. that pseudo that gets you a
35:52
long way, but there's no way that
35:54
we can explain everything that we do.
35:57
In those terms other than
35:59
with some kind of evolutionary
36:01
psychological you know just says
36:03
story with sometimes happens. Here
36:06
I mean, if is like you know, I mean
36:08
one way to get around that is to say
36:10
you know there's his prime goals which our survival
36:12
and reproduction. and then there's a bunch of subsidiary
36:15
goals that contribute to that. And. You know,
36:17
life is an elaboration of a lot of
36:19
those subsidiary goals I wanted to ask a
36:21
been like to me that idea. The agency
36:23
becomes really interesting when we think about. Agency.
36:26
Occurring at different levels simultaneously.
36:28
So, for example, Large.
36:30
Multi cellular animals like myself? How. Golf.
36:33
And purposes. I'm an agent, but each of
36:35
my cells also you could think of as
36:38
being an agent, right? So we have sort
36:40
of nested levels of agency, right? And and
36:42
I guess that bronze out this idea of
36:44
agency and an interesting way. And it is,
36:47
or a sort of general way to think
36:49
about agency across all of those levels simultaneously.
36:52
I. Think the simplest the that
36:54
is if there isn't ours does that.
36:56
I don't know it, but I think
36:59
that that is as a really important
37:01
and interesting question. You know, add one
37:03
that informs all sorts of other questions.
37:06
Or how is it that if
37:08
we recognize that every and I would
37:10
argue that every living cell is an
37:12
agent? In some sense even bacteria have
37:15
a kind of agency. How is
37:17
it that multi cellular creatures are viable?
37:19
It's all in a rather than just
37:21
being. Torn apart by the agency
37:23
evil their part of a you could
37:26
say this is Richard Dawkins is talked
37:28
about the paradox of the organism that
37:30
he's talked about that from a gene
37:32
centric view which I find harder to
37:34
understand but certainly if we think about
37:36
it and from the the the point
37:38
of view of cells, the agents and
37:40
there is a sort of paradox as
37:42
you know how that works but it
37:44
is one that I think either we
37:46
can think about and start to understand
37:48
but it of we are collective agents.
37:51
narration see as corrective. In a big
37:53
part of our agency of course comes
37:55
from our complex commission and eat. A
37:57
One thing that I've argued a factor
37:59
they argue dated my previous book in
38:02
the book of mine's is that are
38:04
you know I would say I mean
38:06
aren't you talked about of having it
38:08
out and this of overarching goals, reproduction
38:10
and survival and then we should have
38:13
do other things and racing to that?
38:15
I would argue that minds ah, we
38:17
have minds because we are as complex
38:19
creatures. There is no way that we
38:21
can predict what we going to face
38:24
tomorrow or in the next moment. Our
38:26
behavior and our environments is just too
38:28
complex to have any sort. Of hard
38:30
wired solution to everything that we
38:32
might face. Bacteria are much simpler
38:34
and that can have a more
38:37
automated response although even they don't
38:39
have any toilet and I think
38:41
brains are evolution solution to that.
38:43
That instead of giving us some
38:45
you know hardwired response to every
38:47
situation or even instead of giving
38:49
us some computer because I don't
38:51
think the brain meaningfully as a
38:53
computer that kind of some have
38:55
computes what we have to do
38:57
next. It wouldn't have the time.
39:00
To do that it's no guns that
39:02
uses rules of thumb rarely Yeah to
39:04
do to do something that we have
39:07
found through trial and error, through experience
39:09
and through some degree of and eight
39:11
nests to be usually good enough to
39:14
be good enough to two hours to
39:16
get by and. What that
39:18
ends up doing is giving us
39:20
more innocent, more cognitive capacity. The
39:22
we would seem to really have
39:25
any need for steps. What is
39:27
they? Evolutionary of function of being
39:29
able to devices? Theory of General
39:31
Relativity? Why on earth do we
39:33
do that will? It's because in
39:35
order to have these brains that
39:37
can function well enough in our
39:39
environment to give it says it's
39:42
capacity as doing these things that
39:44
seem to have no evolutionary benefits
39:46
and in fact some things. That
39:48
seem to be counterproductive. Get a
39:50
non adaptive and that's just what
39:52
minds are like. But I think
39:54
in arguing the book that actually
39:56
when we start to think about
39:58
what agency rarely is. One agency
40:00
requires it requires things like
40:02
memory. It requires things like
40:04
having some sort of internal
40:07
representation of your environment so
40:09
that you can anticipate what
40:11
you might find when we
40:13
start to think about it.
40:15
That way, we have to
40:17
start thinking of every living
40:19
thing, down to single celled
40:21
organisms as innocent cognitive agents,
40:23
not just stimulus response machines.
40:25
That own life is cognitive.
40:28
At agreed and in of that sort
40:30
of foreshadows are questions to you about
40:32
Mike Levin's work, but let's hold off
40:34
on those for just a second and
40:36
stick in the spaces in a why
40:38
agency. And then I think you've articulated.
40:40
Some. About the utility of
40:42
agency but what are they
40:44
come from? So you know, art
40:47
raised the issue of conflicts across levels.
40:49
but where did it start? Added a
40:51
got going: Is it heritable that even
40:53
makes sense to ask that question? Is
40:55
it sort of variable among individuals and
40:57
a population Is our way to merge
40:59
these concepts of these the sort of
41:01
frameworks really? Yeah. And
41:03
these are absolutely the questions that
41:05
should motivate Having a theory of
41:07
agency said that we can get
41:09
some handle on them on a
41:12
where did it come from? I
41:14
think that actually eight correlates completely
41:16
with with living things. and actually
41:18
I don't think anything can be
41:20
truly alive if he doesn't have
41:22
agency. I don't think necessarily the
41:24
converse is true. I think that
41:26
we may end up making genuine
41:29
agent show machines A I basically
41:31
might already have some. Degree of Asian
41:33
say it might already be setting his home
41:35
goes to some degree. so you know I
41:37
don't think the only living things can be
41:40
agents although at the moment I suspect of
41:42
living things are are genuine agents. But that
41:44
may change the future. But I do think
41:46
that know living thing cannot be an agent
41:49
that everything in life has been. I did
41:51
so we have. What that means is that
41:53
in order to I'm in the origin of
41:55
life is complex enough already. Okay without introducing
41:58
agency. but I would hope that I. We
42:00
by introducing agencies we can focus like
42:02
Christian a bit more because you know
42:04
so often discussions about the to the
42:06
the origin of life they they might
42:08
start of listing various things, that living
42:10
thing, how to be any good and
42:12
to get a reproduce have to be
42:14
metabolized. it's just that a certain kind
42:16
of shopping list that you know if
42:18
it no one agrees on and that
42:20
might see more or less arbitrary but
42:22
I think that the to have a
42:24
genuine living fake you have to have.
42:27
Created. In some way, agency
42:29
and so fully understand what is needed
42:31
for agency. And you know, as I
42:33
say, I've mentioned some of them, I
42:35
think it does need some sort of
42:38
memory. They're out of physical series that
42:40
suggests the. Only by
42:42
having memory and by using that to
42:44
create some for representation of the environment
42:47
only systems right? That can be some
42:49
a dynamically efficient. Otherwise, I made
42:51
it through the speaking at even literally
42:53
speaking. Otherwise you just bumping into stuff
42:56
all the time because you're not anticipating
42:58
what's coming into. That's very inefficient.
43:00
So we can start by thinking about
43:02
what agency is and what it requires.
43:05
Breaking it down, we can start to
43:07
formulate some questions about what would have
43:10
been required for life to begin. That
43:12
it outside the normal ones? Have
43:14
you know have you made replicating
43:16
molecules? howdy my dna and settles.
43:18
Yeah. Do you think that
43:21
agency is something that we can
43:23
directly measure? Or is it one
43:25
of these more abstract kind of
43:27
things like fitness that we know
43:29
is really important but takes lots
43:31
and lots of different forms and
43:33
is context dependent and mean. Will
43:36
we ever had an agent amateur
43:38
Fat Yeah. Great question and I
43:40
can't answer that with confidence. I
43:42
do think that it will be
43:44
possible to. An atomizer agency
43:46
to say was this is you know,
43:49
as I should have hinted that Asians
43:51
have to have these particular characteristics. I
43:53
don't expect any kinda versions on exactly
43:55
what those need debates, and I think
43:58
it's quite reason suppose that things will
44:00
have degrees of agency in much the
44:02
same way as we imagine living things
44:05
have degrees of sentence, but I think
44:07
there has to be some agency as
44:09
I say for it to be alive
44:12
did. Over there, different degrees of agency
44:14
would probably also different types of agency
44:16
in much the same way as I
44:18
think we need to stop thinking of
44:21
consciousness as a single thing, like a
44:23
single you know fluid that we have
44:25
more or less all have different organisms.
44:28
I think there are different dimensions. To
44:30
consciousness I think there will be to
44:32
Agency says that some agents will be
44:34
very good at doing particular things. I
44:37
might have been a particularly good memories
44:39
for example, some agents might be particularly
44:41
good at actuating thanks. a lot of
44:43
been home to move of being able
44:45
to sense in certain ways so you
44:47
know I think we could break it
44:49
down and an atomizer. but whether we
44:52
could I ever really sort of quantify
44:54
that I'm agnostic about at this point
44:56
is why we need a theory to
44:58
to help us. Yeah. I've
45:00
been enough. understandable and it's also great. The
45:02
here caution You know the did not want
45:04
to go too far but as these ideas
45:06
had been and ass off for a long
45:08
time and and just started to come around
45:11
as we intend to formalize and you've used
45:13
the word a couple of times it's sort
45:15
of as conflicts with of the we're talking
45:17
about a minute ago or you I guess
45:19
youth implied that agency may be decomposed bull.
45:21
Is that what you mean A minute? If it
45:24
is sort is what Is it? A substrate of
45:26
emerges causalities to go back to what we are
45:28
talking about before any net raises the bar for
45:30
of measurement, doesn't it? Had we put these two
45:33
things together. Yeah well it does
45:35
except that I would hope that if we
45:37
can decompose the i feel we probably can
45:39
then perhaps we can quantify it a bit
45:42
better because I'm we can start to even
45:44
think about the individual components and again you
45:46
know I'm using memory because it said of
45:48
for as familiar wonder you we can kind
45:51
of measure the amount of memory that something
45:53
has and I should say in fact that
45:55
of better discussion than I'm going to be
45:57
a to give of what of how the
46:00
to and optimize agency and you know how
46:02
to think about eight in Tibet a discussion
46:04
is you can find it it in a
46:07
book called free Agents by the Irish Here
46:09
scientists Kevin Mitchell which I'd really recommend of
46:11
which I it's you know drill on for
46:13
quite a bit for my discussions of agency
46:16
we totally agree we just had Cabin on
46:18
and that a month ago process is a
46:20
great bus fare very good but yes so
46:22
I think we probably can't and atomizer. One
46:25
thing though I would mean this is Pat
46:27
scared to sad. More controversial is that's as
46:29
lied. To the notion of agency and
46:32
to the recognition that agents have purpose.
46:34
I think we need to be able
46:36
to start talking about meaning. And.
46:38
Living Systems and that that will send
46:40
a lot of people scuffling a fighter.
46:42
I know because assess as a spot.
46:45
Here's what I made by that because
46:47
I have the start of the.i say
46:49
that I think one way to think
46:51
about living things is that they are
46:53
creators of meanings. And what I mean
46:55
by that is that any living thing.
46:58
Is going to inhabit this environment
47:00
that is full of stuff happening,
47:02
full of what we might think
47:04
of his information. We know that
47:06
that that's the case. We have
47:08
all the sensory inputs coming towards
47:10
us. What a living thing has
47:12
to be able to do is
47:14
to celta that information to figure
47:16
out what matters for survival. it
47:19
as first and foremost of what
47:21
doesn't and different organisms have made
47:23
different assistance of our that so
47:25
that it as for us. Vision
47:27
is really important. Because that's in
47:29
the nature of our environments It as
47:31
for don't smell laser really important thing
47:33
for lots of creatures in the seats.
47:36
Didn't have a deep ocean vision isn't
47:38
gonna get very far because it's just
47:40
to.down as a it's have other senses
47:42
but they have different ways of filtering
47:45
that information but not as filtering it
47:47
but giving it some kind of valence
47:49
it out. How much attention do I
47:51
have to pay to this information? How
47:53
worried? If you like to put a
47:56
anthropomorphic they have where he should. I
47:58
be that I've just had this thing. Well
48:00
that signal how interested should I be
48:02
in it? So I think that this
48:05
is so that Living Systems games they
48:07
don't necessarily know those the doesn't have
48:09
to be any awareness, any conscious awareness
48:12
of that happening that they have to
48:14
have some system for creating a surveillance
48:16
to their response And that's what I
48:18
mean by meaning and enough they have
48:21
to be able to do that in
48:23
order to not be overwhelmed that in
48:25
order to not cannot promote of information
48:28
on store old that isn't going. To
48:30
be any use to them because
48:32
again, as inefficient how that is
48:34
very specific sense. I think living
48:37
things do create meaning from what
48:39
I experience. Great!
48:41
I have a question from the skeptics
48:43
corner and this comes from party Whether
48:45
other couples ten damper on I I
48:48
I sort of has. you'd ask this
48:50
question itself, but he's asked me and
48:52
Marty several times some hard questions about
48:55
what we mean by agency and his
48:57
take on it is. there is no
48:59
clear necessarily what the differences between agency
49:02
and just plain old phenotypic plasticity which
49:04
he spent a lot of time thinking
49:06
about, Lot of time studying and I
49:08
think you could argue that. You
49:10
know what are the systems that
49:13
instantiate this idea of phenotypic plasticity?
49:15
Their complex systems that are sensing
49:17
the world. And. Making decisions about
49:20
how the altar phenotypes across different spatial
49:22
and temporal scales from very rapidly to
49:24
very long term development on kinds of
49:26
changes and you know it's hard for
49:29
me to come back to camp and
49:31
say, well, I think agency is something
49:33
else and that so would you say
49:35
something different about that. Yeah.
49:38
That is very good question. I
49:40
guess it's not. Clear
49:42
to me. Where
49:44
if with simply thinking in
49:46
terms of phenotypic plasticity. Were
49:49
in that picture, were going to get notions
49:52
of purpose and goals It may be in
49:54
there may be the right is that I'm
49:56
not familiar enough with that way of thinking
49:58
to know that. But I. I feel
50:00
like that's the key thing that we
50:03
have to recognize with agents. We have
50:05
to think about them as having some
50:07
sort of goals that it internally set
50:09
and you know one reflection of that
50:12
is even for be different. Need some
50:14
sort of bank here and I suspect
50:16
roses the bacteria we can give look
50:19
look to be an identical population of
50:21
South. And. Identical stimulus and
50:23
I want or responded the same
50:25
way because I'm in now Be
50:27
Some to Cast is Dns. Some
50:29
of that will be random, but
50:32
some of that will be purposeful
50:34
in the sense that because I
50:36
had different histories they will have
50:38
different internal settings, little conditions, the
50:40
response that they give and I
50:42
think it's meaningful to talk about
50:44
that is those bacteria having different
50:46
goals which you know rationalize is
50:49
the different responses are they will
50:51
have so it seems. To me
50:53
that that's something that goes beyond
50:55
simply recognizing phenotypic plasticity in the
50:58
sense of recognizing will I can
51:00
be these differences Maybe it's really
51:02
about asking me why is that
51:05
what is driving in of causes
51:07
of those different responses and that
51:09
has to come down to some
51:12
notion of the system and making
51:14
a decision ready making decisions that
51:16
that are related to interview you
51:19
only make decisions if you Goals.
51:37
So we'd such done a consequences
51:39
of agency and assorted systems thinking
51:41
for how we should think about
51:43
problems and issues. and in medicine,
51:45
I think it's a good point
51:47
just to return to that. and
51:49
the point you're making it the
51:51
very beginning of our conversation was
51:53
that you know it's hard often
51:55
to trace particular medical situations to
51:57
particular Los I. And that's because
51:59
these. Los I of causation ertl was
52:01
I have agency or spread out across the
52:03
body Maybe let's talk about that in the
52:06
context of cancer. Yes I'm quite interesting things
52:08
that you say about cancer and you know
52:10
if we just or a step back and
52:12
say well what is cancer. It's
52:15
effectively cells that. Are.
52:17
Going rogue is in the sense
52:19
that they're giving up on this
52:21
common project of running an operating
52:23
a multi slater body and they
52:25
strike off on their own and
52:27
they become selfish. It becomes about
52:29
them and I think one way
52:31
to conceive of that is that
52:33
something about their a general decisions
52:35
their purposes have changed. So what
52:38
is it about writing this book
52:40
that influence in our other sort
52:42
a new horizons for how we
52:44
should think about the origins and
52:46
possible treatments of. Cancer. Yeah.
52:48
I think they're absolutely are. And I
52:50
think that one of the things that
52:53
seems to me to have happened again
52:55
over the past maybe ten twenty years
52:57
is that that picture that you've just
52:59
presented about the way to think about
53:01
cancer that that I think to has
53:03
changed. So this notion that is the
53:05
cancer cell is a rogue sound is
53:07
it has become selfishness during its and
53:10
things clearly cancer cells are in a
53:12
sense if you like and not cooperating
53:14
with the rest of the body but.
53:16
They aren't total individualists. It's
53:18
really, really striking that now
53:20
that we have the technologies
53:22
to be able to have
53:24
a single cell basis, look
53:26
at what is really going
53:28
on inside a tumor. We
53:30
find that actually, rather than
53:33
just being this undifferentiated mass
53:35
of proliferating cells, each of
53:37
them an individualist, it's more
53:39
like. And I use
53:41
this phrase. I think it is.
53:43
I have this phrase from Brad
53:45
Bernstein originally that it's more like
53:48
it rains recapitulation of development stuff.
53:50
Actually, to must have some characteristics
53:52
of organ. Sit there at different
53:54
types of cel within them and
53:57
they seem to be operating more
53:59
like a kind go crazy organ
54:01
than just a you know, a
54:04
massive individuals and even to the
54:06
extent that we see. Team.
54:08
As a Killer. Getting healthy
54:10
cells and including healthy cells
54:12
within the two months to
54:14
do things for that tumor
54:16
and do doing things. That.
54:19
They sort of do normally be to make
54:21
them to be developing in of blood surprise
54:23
for example you know the skin or as
54:25
a ton of the Dubai is really important
54:28
and that's one of these the things that
54:30
is often our tax to drive your tank
54:32
the demon. So I think the view of
54:34
cancer or you know has has changed in
54:37
that regard that it's perhaps better to see
54:39
it as a an aberrant form of development
54:41
rather than as in our on a Single
54:43
Help and his. But I also kind of.
54:46
I think it's more useful to see at
54:48
not as. So much as cells
54:50
that have totally gone rogue but
54:52
that south of have acquired one
54:55
of the many different possible state
54:57
that ourselves can form that it's
54:59
I think about it more in
55:02
terms of Waddington Screen this landscape
55:04
of possibilities. Time salute the the
55:06
way that Silva now being thought
55:09
of in terms of how they
55:11
find their fate sits on a
55:13
landscape which era face value seems
55:16
to be a landscape of enormous
55:18
complexity. Of multi dimensional complexity if
55:20
you think of how many it of
55:22
jeans we haven't habit a different types
55:25
of regulatory system we have that the
55:27
the possibilities for cel seem endless and
55:29
yet there seem to be only a
55:32
few different states have a for relatively
55:34
few and they seem to find them
55:36
quite sort of reliably and some of
55:38
those states will be ones corresponding to
55:41
to cancel like states and cells can
55:43
flip over into those and eat at
55:45
this is being sort of and analyze
55:48
now innocent. Of dynamical systems framework where
55:50
we think of in a one
55:52
of the different collective states as
55:54
the d network can form of one
55:56
of them have some of them
55:58
corresponds to these. The that we
56:01
we can go with cancer cells
56:03
and thinking about it that way.
56:05
I mean I his first saw
56:07
it. I think it creates more
56:09
realism about cancer because I think
56:11
drugs or is just a consequence
56:13
of being multicellular organisms. You know
56:15
every organism has some organisms, right?
56:18
Whales have better defenses against it
56:20
so they have less cancer. but
56:22
it's something that old multicellular organisms
56:24
are going to be vulnerable to
56:26
just as misfolded protein states that
56:28
give rise to things. Right in
56:30
a near degenerative diseases are attacks
56:32
against is having protein. This is
56:34
just something the proceeds will do.
56:36
and this means that we need
56:38
to think about cancer treatment listeners
56:40
something to be eradicated which is
56:42
just not possible for it. Instead,
56:44
if if we think about it
56:47
is wanting to guide ourselves to
56:49
stay on track to stay one
56:51
of these healthy valleys, adults go
56:53
over to one of the others.
56:55
And even to the extent that there are.
56:57
Now these approaches to treating Canseco differentiation
56:59
therapy were what you're trying to do
57:02
is instead of just blasting them and
57:04
tried to kill off as many as
57:06
you can without telling over healthy stuff
57:09
as well. It's more along the lines
57:11
are thinking about it in terms of
57:13
sell reprogramming with were doing for other
57:15
purposes but reprogramming cancer cells to bring
57:18
them back on track to bring them
57:20
back into a healthy state. or perhaps
57:22
programming them in a way where they
57:24
get stuck in a dead end where
57:27
they. Tom proliferate aware that kind
57:29
of sitting ducks for chemotherapy.
57:31
so he does it. Hopefully
57:33
this way of thinking about
57:35
cancer as a sort of
57:37
dynamical systems sort of take
57:39
just that. This that might
57:41
lead to other approaches to
57:43
attacking. While. And you know
57:46
one thing that dissemination them anything
57:48
to things thirst. Do you think
57:50
that tumors may be used to
57:52
sort of these quasi agents to
57:54
understand the composition algae of agency?
57:56
Because if they're sort of organs
57:58
of a sort. They're not quite
58:00
and the some composite of things that
58:02
have it existed before but they do
58:04
have agency and away have a mic.
58:07
Maybe tumors could be a useful model
58:09
of understand the agency. Well I
58:11
think he hasn't Really interesting I thinking
58:13
that the I certainly think that. Thinking
58:16
about to move from an agent for
58:18
point of view makes a lot of
58:20
sense because either them we need to
58:22
ask what manner of agents all about
58:24
what all that goals and as I
58:26
say you know that goes now seem
58:28
no longer to base well I'm just
58:30
gonna go proliferate as much as possible.
58:33
It's much more that they have club
58:35
active again so goals you know to
58:37
develop his ways it as meat silly
58:39
supporting within a tumor and that make
58:41
use of some of the agency that
58:43
healthy cells have club as also sort
58:45
of motivated. To think about that because I
58:47
know you read a lot about Mike Levin's work
58:49
with frog embryos my son amazing work with that
58:52
on the shelves many times that one of the
58:54
things that you emphasize or his you know bots.
58:56
So I wonder as you talk with Mike about
58:58
sort of. Combinations of frog
59:00
embryos cells to produce a variety
59:03
is seeding tumors and sort of
59:05
understanding their behavior. And a
59:07
searched understand cancer. Is it something that he's progressing?
59:10
It absolutely is. I've I've talked to a lot
59:12
to Mike over the years. You know for this
59:14
book and for other things in front of. When
59:16
I was in Boston when I was at Harvard
59:19
I visited Mike in the lab and that was
59:21
when I first. Woke. Up
59:23
to just on a new Every time I
59:25
speak to my A seems like he has
59:27
had new ideas have an answer to your
59:29
best and amongst those he's absolutely now and
59:32
as you know it he's gone public about
59:34
this already so I can say he's it
59:36
versus of of for me to start up
59:38
companies to make use of the word that
59:40
he's done on the scene about systems to
59:42
to find applications for them and it Of
59:44
by Medicine is absolutely going to be one
59:47
that they're going to be looking and it's
59:49
very early days whether it's going to pan
59:51
out or not I don't think. My nose
59:53
and alone anyone else. but you know,
59:55
Eight absolutely seems to be a sensible
59:57
way to to proceed. Yes, oh his.
1:00:00
Work on cedar box. It was another sort
1:00:02
of. I guess is
1:00:04
a you know trigger for getting me
1:00:06
to really think about what the broader
1:00:08
concepts of this book all because one
1:00:10
of that things that is the seem
1:00:13
to. Jump. Have from
1:00:15
the idea of thinking about cells
1:00:17
as these complex systems that have
1:00:20
it of a landscape of different
1:00:22
possibilities. Once you start thinking about
1:00:24
that, it seems I think pretty
1:00:27
inevitable that it's unlikely that evolution
1:00:29
has explored all the possible states
1:00:31
that ourselves half. I think it's
1:00:34
if it's very unlikely the road.
1:00:36
So what else is out there?
1:00:38
What? What This tissue types might?
1:00:41
cells be able to form that.
1:00:43
We haven't seen because you know evolution
1:00:46
just hasn't got there, hasn't had a
1:00:48
need for them. It seems utterly incredible
1:00:50
to think that is what evolution has
1:00:53
found. His exhaustive of all the possibilities
1:00:55
ourselves could do any more than evolution
1:00:57
will have exhausted all the possible proteins
1:01:00
that exists. Still, you know the possible
1:01:02
gene sequences. so what else is out
1:01:04
there in this is a in ah
1:01:07
solidity, what might is doing all this
1:01:09
other states of in his case you
1:01:11
know. He started with from sales. Other
1:01:14
states at these cells can have that
1:01:16
can be liberated that we can find
1:01:18
our way to and he found his
1:01:21
way to these ones that he causes
1:01:23
About Switzer didn't have collections of cells
1:01:25
are they're absolutely homeless. that a forms.
1:01:28
They're not just individual cells doing that.
1:01:30
it it offends the things. That are
1:01:32
formed that seem to. Be collective agents
1:01:34
of some sort and that has
1:01:36
as far as we can say
1:01:38
they don't correspond to anything that
1:01:40
we find in nature. I made
1:01:42
we've seen. You know that there
1:01:44
are observations going way back beyond
1:01:46
Mike's work for structures of this
1:01:48
sort that that frog cells in
1:01:51
particular seem to be able to
1:01:53
form but by by looking at
1:01:55
those rather than seeing those as
1:01:57
get updates of tissue that have
1:01:59
just started. Them loose or whatever.
1:02:01
Looking at them as potential agent
1:02:03
and seeing what they do if
1:02:05
left to their own devices ear
1:02:07
the A revealed all this kind
1:02:09
of behavior that had. presumably.
1:02:12
Been overlooked before. How advanced? Absolutely
1:02:14
the kind of thing that Mike's
1:02:16
experiments in a got me thinking
1:02:18
about. And of course he was
1:02:20
have way before me. Insane. What
1:02:22
else can sounds month that know
1:02:24
haven't made? Oregon? And you
1:02:27
know that leads us into
1:02:29
whole area's soft tissue engineering
1:02:31
and is straight biotechnology for
1:02:33
multi cellular biotechnologies. One else
1:02:35
can we build with cells?
1:02:38
And I guess I should mention that why
1:02:41
we called him a genuine i prefer Sudden
1:02:43
as a general is that the Duchess conglomeration
1:02:45
to sell that sit in a dish. Me:
1:02:47
these are new entity isn't entity that never
1:02:49
existed in evolutionary past As the conglomerations they
1:02:51
are different frogs but these are different kinds
1:02:54
of cells are you put them in mazes
1:02:56
with resource gradients and they can use the
1:02:58
sillier. Had thera. Follow. These resource
1:03:00
gradients and in that's what makes it a gentle.
1:03:02
they're not dying. As long as you're giving the
1:03:04
resources they're behaving. You're doing. And. To
1:03:07
me, I think you know one of
1:03:09
the mind blowing take away his here's
1:03:11
the agency of Emerges Re nationally when
1:03:13
you put cells together and to agglomerations,
1:03:15
right? It doesn't take some magic evolutionary
1:03:17
want that operates over a long period
1:03:19
of time, but rather the samosas capacity
1:03:21
of cells to form higher level agents
1:03:23
just directly when they come into contact
1:03:25
with one another either gets kind of
1:03:27
amazing. It is because it's not at
1:03:29
all obvious that they should do that.
1:03:31
Perfect. You know, even if we admit
1:03:33
that individual cells are Asians. How
1:03:36
do they collectively? In
1:03:38
of decide on the some some sort
1:03:40
of group of activists your life. you
1:03:42
know I should say that there are
1:03:44
people who say of my work well
1:03:47
what we're saying in this behavior it's
1:03:49
not actually purposefully so. Goal directed is
1:03:51
not a really I didn't so it's
1:03:53
just you know the playing out of
1:03:55
the things that the cells to share
1:03:57
the waving about of silly i would
1:03:59
happen to create this sort of motion
1:04:01
that isn't emotions you know with any
1:04:04
sort of goal or purpose. so there
1:04:06
are you know that there are people
1:04:08
a sort of pushed back on that
1:04:10
idea but I think it seems to
1:04:12
me hard to understand some of the
1:04:14
things that might have seen Xena bullets
1:04:16
do unless we. Bring and
1:04:18
a gentle picture to it. Now
1:04:22
hundred traits. Well, we're getting pretty close
1:04:24
to the end of our time. That
1:04:26
of will be guy wanted to ask
1:04:28
you about some really interesting thing, but
1:04:30
you had just of the very end
1:04:32
of your buck. You had this sort
1:04:34
of extended box at the end of
1:04:36
the last chapter and in it you
1:04:38
start to explore some of the consequences
1:04:40
or even just a question of are
1:04:42
there are consequences for how we understand
1:04:44
evolution of agency And this is quite
1:04:46
interesting. Of course, in light of this
1:04:48
ongoing controversy over the past couple of
1:04:50
decades about. What should the scope of
1:04:52
modern evolutionary theory be? How much of an
1:04:54
overhaul does it need? How inclusive and it
1:04:57
be of new ideas? I guess I just
1:04:59
want to. But the question to you directly,
1:05:01
like after having written or spoken thought a
1:05:03
lot about agency, Do you think it changes
1:05:06
in any fundamental way? How we should understand
1:05:08
the evolutionary process? Yeah
1:05:10
oh I would say on that is
1:05:12
it might do have a nice I'd.this
1:05:14
question naughty for view earlier idea of
1:05:16
what does have a revolution? it's and
1:05:18
I do tuck it in the book.
1:05:20
It is to some extent as well
1:05:23
because as you say I leave notice
1:05:25
this box at the end. Other two
1:05:27
reasons for that one it is that
1:05:29
I think I know enough about evolutionary
1:05:31
theory to know how little I know
1:05:33
about it and to know how vast
1:05:35
my ignorance of it is and also
1:05:37
to know how suffer ladies so I
1:05:39
don't. Feel I am well informed
1:05:41
enough about evolutionary theory to be
1:05:44
confident as a meeting about that.
1:05:46
But the other reason perhaps a
1:05:48
better reason for me being circumspect
1:05:51
about that is I don't think
1:05:53
anyone knows well enough at the
1:05:55
moment what these new perspectives on
1:05:58
biology are going to imply. For
1:06:00
evolutionary theory, I think it's
1:06:02
absolutely conceivable that when we
1:06:04
start to think of organisms
1:06:06
as agents that have their
1:06:09
own purposes and goals, including
1:06:11
ones that enable them to
1:06:13
change themselves and to change
1:06:15
their i make up in
1:06:17
some ways. the question of
1:06:19
is that going to impact
1:06:21
standard near Darwinian evolutionary theory
1:06:23
that was predicated previously on
1:06:26
seeing Morgan is of justice.
1:06:28
If you like passenger vehicles,
1:06:30
For jeans, you know they're no longer
1:06:32
passive. They're actually it's top down control
1:06:34
agents. Is that going to change the
1:06:36
theories it seems at entirely reasonable in
1:06:39
fact and an unavoidable question to ask.
1:06:41
but I don't think we know the
1:06:43
answer to that at the moment and
1:06:45
sites in our you you mentioned that
1:06:47
there are some people who are gonna
1:06:49
push back on some. The thing to
1:06:52
this book says I absolutely anticipated that
1:06:54
and absorbed into see more of it.
1:06:56
but I think of myself as quite
1:06:58
conservative and these respects because. I'm totally
1:07:00
it's agnostic about whether we need
1:07:03
something like this new evolutionary, extended
1:07:05
evolutionary sense as as or whether
1:07:07
you know we just need to
1:07:09
tweak standard near darwinian theory. A
1:07:11
Whether in fact, a lot of
1:07:13
these things are already in there,
1:07:16
a Weather's Nice Construction already incorporates
1:07:18
his idea, as you know, a
1:07:20
gentle behavior from organisms. I'm totally
1:07:22
on the fence about that because
1:07:24
I don't think I understand the
1:07:26
issues well enough to decide, but
1:07:28
also has a. Anyone does I thank
1:07:31
you? Probably spend a dentist was about
1:07:33
this. Dennis is a fantastic book we
1:07:35
have. Yes, yep, yep. You know I
1:07:37
think he makes a great case for
1:07:39
why weeds really do need to revise
1:07:41
the lots of our ideas and evolutionary
1:07:43
theories. You know, it's a really interesting
1:07:46
case that as I say, I'm agnostic
1:07:48
about how much of that is needed
1:07:50
or how much is understood at the
1:07:52
moment. but these are. Definitely.
1:07:54
Questions that this new sort
1:07:56
of perspective on living things
1:07:59
as aging, That definitely questions
1:08:01
that that perspective raises. Yeah, okay, last question,
1:08:03
sort of. Last question the first. I appreciate.
1:08:05
You know, the sort of caution that that's
1:08:07
really refreshing to hear because for a long
1:08:10
time we did hear there's a need for
1:08:12
It's an extended Everly Shards synthesis and that
1:08:14
just lead to a lot of arguments. It
1:08:16
feels like people talking past each other so
1:08:19
that that take was a fresh in your
1:08:21
book. Very much can say that perspective. One
1:08:23
of the other things that it says is
1:08:26
that in a we should maybe look for
1:08:28
or provide better metaphors besides agency. I. Think
1:08:30
you're clearly behind agency is one of
1:08:32
those, but the have other said mind
1:08:34
or the have specific ways that you
1:08:37
think that agency can be a useful
1:08:39
metaphor. Yeah, well. the notion of metaphors
1:08:41
in biology is is also pretty central
1:08:44
to what I talk about in this
1:08:46
book because it became clear to me
1:08:48
it's first of all how much everything
1:08:50
we say depends on metaphor. Idol language
1:08:53
spends. A metaphor for the everything in
1:08:55
science depends on that. But I think
1:08:57
the life sciences are particularly reliant on
1:09:00
metaphor because. Life is such
1:09:02
a complex thing and so that's
1:09:04
essential. It's necessary. It's useful. But
1:09:06
he's also dangerous because these metaphors
1:09:09
become so strong. The blueprints. you
1:09:11
know for the genome. the selfish
1:09:13
gene. We introduce him for a
1:09:16
reason, but then they get still.
1:09:19
And they become what is often called dead
1:09:21
metaphors which means not the they're actually get
1:09:23
a not use. That means that we forget
1:09:25
the they're metaphors and we just months. This
1:09:28
is how the way things are and then
1:09:30
that's when they become really dangerous. And
1:09:32
there's no good way for aren't
1:09:34
rooted metaphors We know. How to deal
1:09:36
with series we tested against experiment. You
1:09:38
know if the ferry gives wrong prediction
1:09:40
that eventually they get jumped out So
1:09:42
we know about that. But metaphors. There's
1:09:44
no mechanism inside syrup rooting them. and
1:09:47
I think that that's a real problems.
1:09:49
So I really wanted to push back
1:09:51
on some of the metaphors we used
1:09:53
the machine matter for in you know,
1:09:55
it bows he to I really wanted
1:09:57
to say knows, they're very good arguments
1:09:59
I think. Showing now that that's
1:10:01
not a good way to think about
1:10:03
living things, nor is it good to
1:10:05
to bring in computer metaphors. too much
1:10:08
so. yeah, we need new metaphors and
1:10:10
I don't yet know what some of
1:10:12
that is. All but one thing that
1:10:14
did become I felt clear to me
1:10:16
in the course of this book is
1:10:19
that perhaps life needs to be. Living
1:10:21
systems need to be that own metaphor.
1:10:23
Biology needs to be the source of
1:10:25
it's a metaphor rather than during a
1:10:27
metaphor. For math technologies. we don't have
1:10:30
any technology. That works in the
1:10:32
way life does none and so we
1:10:34
need to get rid of those have
1:10:36
some is metaphors and for example yeah
1:10:38
I talked about this wasn't my idea
1:10:40
either that how. The combinatorial systems
1:10:43
that we see working
1:10:45
in gene regulation. Where I
1:10:47
you know talked about all these committees
1:10:49
of molecules working together in some fashion.
1:10:52
A great metaphor for that is the
1:10:54
way our own factory system works. Where
1:10:56
we have you know, justice kind of
1:10:58
few hundred sensory receptors. Or
1:11:00
we have millions and millions of
1:11:03
different into significant for those because.
1:11:05
I grew up combinatorial and so
1:11:07
there's you know, a metaphor where
1:11:09
we could use one living system
1:11:11
to refer to another. The whole
1:11:13
notion of living systems as cognitive
1:11:15
beings don't move agents, comforted systems
1:11:17
that is out in a sense
1:11:19
a metaphor that comes from cognition
1:11:21
Council. the way our brains worth
1:11:23
a maybe something more than that
1:11:25
but certainly again. I think it's
1:11:27
a a this say to a
1:11:29
set of more useful matter for
1:11:32
than a sort of machine bags
1:11:34
metaphor. So that's. As much as
1:11:36
I can offer this stage that actually
1:11:38
into get good metaphor for living systems
1:11:40
look for other living systems to draw
1:11:43
them from. That makes sense. Now.
1:11:46
Well. That's just a beautiful and of I got
1:11:48
the great place to stop so ball thanks so
1:11:50
much for the conversation has been a total delight.
1:11:52
We always ask our guess at the very end
1:11:54
as as anything else you'd like to say the
1:11:56
thing we didn't cover that is like to have
1:11:58
last word on. I think you've tried
1:12:01
have gone. It's got in my mind from
1:12:03
the start to the finish of my book
1:12:05
so I think I have happened. If you're
1:12:07
a very debris and civic during that we
1:12:09
want to the appendix sorry that into their
1:12:11
defending said there is nothing I feel at
1:12:14
a to add scientists so but both of
1:12:16
us been fantastic talking d. Thanks.
1:12:18
Phil Thanks a lot that you. Listening:
1:12:35
If you like what you hear, let. Us know
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